Alligator sinensis (Chinese alligator): 102376796
Help
Entry
102376796 CDS
T02922
Symbol
LIG3
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102376796 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asn03400
]
102376796 (LIG3)
Enzymes [BR:
asn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
102376796 (LIG3)
DNA repair and recombination proteins [BR:
asn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
102376796 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
102376796
NCBI-ProteinID:
XP_006025809
UniProt:
A0A1U7RM07
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MAEQRYCVDYAKRGTAGCKKCKEKILKGMVRIGKVVPNPFTESGGDMKEWYHVKCIFEKL
ERARATTKKIEDITDLEGWEELQDAEKDLINQLISEATSKSASTPKKKATVQAKLSPSGQ
ITSPKKDPGAVPNPSPKKFSGFTAKPGSSEDTPANSSHKSTLSSKKCDPKHKDCLLREFR
KLCAMVADKPSYNVKTQIIQDFLQKGTGGDGFHGDLYLTIKLLLPGVIKIVYNLNDKQIV
KLFSRIFNCSQDEMVRDLEQGDVSETVRIFFEESRSCPPAAKSLLTIQEVDEFLIGLSKL
TKEDDQQTLLQGITRRCTGNDLKCIIRLIKHDLKMNAGAKHVLDALDPNAYEAFKASRNL
QDVVERVLRNQQEAEKQPGLKRTLSVQASLMTPVQPMLAEACKSIEYAMKKCPNGMYAEI
KYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDFIPRAFPGGHSMILDSEVLLIDNK
TGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPXP
DPLLRDEACHKSFRSGRYDNRVIREGLEGLVLKDIKSTYEPGKRHWLKVKKDYLNEGAMA
DTADLVVLGAFYGQGSKGGMMSIFLMGCYDPKTEKWCTVTKCSGGHDDATLARLQNELDM
VKISKDPNKIPSWLKINKLYYPDFIVPDPKKAPVWEITGAEFSKAEAHTADGISIRFPRC
TRIRDDKDWKTATNLPQLKELYQLSKEKSDFSVVAGEEEVSPAGSSGENDGNSGSSTPHN
TPKTPPRKSPAKTKKSEGNNLVYVTPEKKVEDKRGEKRKAAELDDNGKKILLDIFTGVRL
YLPPSVENFSKIRRYFVAYDGDLVQEFDTASATHVIGDLEENPGAKRVSPSWIWECIRKR
RLVAPC
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacagcggtactgcgtggactacgccaagcgcggcacggccggctgcaagaag
tgcaaggagaagatcctgaagggcatggtccgcattgggaaggttgtgcccaaccccttc
accgagtcgggcggcgacatgaaggagtggtaccacgtgaagtgcatattcgagaagctg
gagcgggctcgtgccaccaccaagaagatcgaggacatcacagacctcgaggggtgggag
gagctgcaagacgccgagaaagacctcatcaaccagcttatctcggaggccacatccaag
tctgcaagcacacctaagaagaaggcaacagtccaggctaagctgtcccccagtgggcag
ataacctcccccaagaaagatccaggagctgttcctaatccatctccaaagaaattctct
ggtttcacagctaaaccaggcagttctgaggacacccctgcaaattcttcccacaagtct
actctgtcttcaaagaagtgtgacccaaagcacaaggattgtttgttgcgggaattcaga
aaattgtgcgccatggttgctgacaaacccagctataacgtgaaaacacagatcatccag
gactttctgcagaaagggactgggggagatggctttcatggtgacttgtacctgactatt
aagctgctgttgccgggtgtcattaaaattgtgtacaacttgaatgacaagcagattgta
aagctgttcagcagaattttcaactgcagccaggatgaaatggtccgggacctggagcag
ggagatgtttcagaaacagtccgcatcttttttgaggagagcaggtcctgtcctccagct
gccaaaagtctcctcacaatccaggaagtggacgagttcctaatcggactgtcaaagctt
acaaaggaggatgaccagcaaactctgcttcagggtatcactcgcaggtgcacgggcaat
gacctgaaatgcatcatcaggcttataaagcacgatttgaaaatgaatgctggtgcaaag
catgtgttagatgctttggatccaaatgcctatgaggcattcaaagcatcacgcaatctt
caggatgttgtggagcgtgtgctaagaaaccagcaggaggcagagaagcagccgggtctg
aagcgaaccctcagtgtgcaggcctctctgatgacccctgttcagcctatgctggctgaa
gcctgcaagtcaatagaatatgccatgaagaagtgtccgaatgggatgtacgcagagatc
aagtatgatggggagcgagtgcaggtccacaagaatggagatcatttcagctacttcagc
cgaagcctcaagccagtccttcctcacaaagtggcccattttaaggacttcatccccaga
gcttttcctggtggacacagtatgatcttggattcagaagttcttctcattgacaacaaa
acaggcaaaccactcccttttgggacccttggagtccacaagaaagctgctttccaagat
gccaatgtctgcttgtttgtatttgattgtatctacttcaatgatgtcagcctgatggac
aggcctttgtgtgagcgtcgtaagtttctccatgataacatggttgaaatccccnagccg
gatcctcttctccgagatgaagcatgtcacaaaagcttcagatctggcagatatgataat
agagtcatccgtgagggactggaaggactggtgctgaaggatataaagagcacgtatgag
ccaggaaaacgtcactggctgaaagtgaaaaaggactatctaaatgaaggtgccatggct
gatacagcagacctggtggttctgggagctttctacggacaaggcagtaaaggtggaatg
atgtcaattttcctaatgggctgctatgatcccaagactgaaaaatggtgtacggtgaca
aagtgctctggtgggcatgatgatgccaccttagctcgcctgcagaatgagctggacatg
gtgaagatcagcaaggatcccaataaaattccaagctggctaaaaataaataagctctac
tatccagatttcattgttccagacccaaagaaggccccagtgtgggagataacaggtgcg
gagttctctaaagcagaagcccacacggcagatgggatttccattcgtttccctcgttgt
acccggatccgagatgacaaagactggaagacagctaccaatctccctcaactcaaggag
ctgtaccagctctccaaagagaagtctgatttcagtgttgttgctggagaggaggaggta
tctccagctggtagcagtggagagaatgatggaaattcagggtcttccacaccacacaat
actcctaaaactcccccaaggaagtcgcctgcaaaaaccaagaagtctgaaggtaacaat
ttagtctatgtgacccccgaaaagaaagtggaggataaacgaggggagaagcggaaagca
gccgagctggatgacaatgggaagaagatattgctggacatatttacaggggtgaggctg
tacctaccaccctccgtggagaacttcagcaaaatccggcggtactttgtggcatatgat
ggggaccttgtacaagagtttgatacggcttctgcaacacatgtgataggggaccttgag
gagaaccctggagctaagcgtgtgtcacccagttggatctgggagtgtatccgcaagcgg
agactggtagccccctgctaa
DBGET
integrated database retrieval system
