Alligator sinensis (Chinese alligator): 102388768
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Entry
102388768 CDS
T02922
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asn01009
]
102388768 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asn04515
]
102388768 (PCDH20)
Protein phosphatases and associated proteins [BR:
asn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102388768 (PCDH20)
Cell adhesion molecules [BR:
asn04515
]
Cadherins
Protocadherins
102388768 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
SGBP_BT4661-like
ORF45
Motif
Other DBs
NCBI-GeneID:
102388768
NCBI-ProteinID:
XP_025063516
UniProt:
A0A3Q0GUQ0
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MGQPRRPASSAARGSLQHLFLVLLFTGPFNCFASYSRATELFYSLNEGLPAGVLIGSLAR
DLQLPGWAAEEEMGAALAIAQGPALSFSLASQGLGGQYVSLDNRSGELHTSTLEIDREVL
CAENGAGTSPPAPSPEACLLLLDVLVLPQEYFRLVKVKIAIRDVNDNAPRFPVPHIRLWV
PENAPVNTRLAIEHPALDPDVGTNGVQTYRLRDDYGVFTLDVEENESGERTPYLIVMGAL
DREARGEYVTLIFAEDGGTPPLVGSATLTVGISDVNDNCPQFGESQLNVTLCGNSSTGAR
VATVHALDADLGSNAQITYSYSQKVPQPSKDLFHLDESKGIVELSRKIDGDTPRLHRLII
LANGPGCIPAVITVLVSIIKVMMRPPEVVPRFIANEVDGVVYLKELEPVNTPIAFFTIKD
PDEKYKVDCYLDGDGPFRLTPYKPYNNEYLLETTKPLDYEVQQLYEISVVAWNSEGFHVN
KIIKVQVLDDNDNSPVFSQQLIELSIEENNVPNAFLAKLHATDADSGERGKVSYYLGPDA
PSYFALDKTTGVLTVSTQLDREEKEKYRYTVKAVDSGLPPRESIATVTITVLDKNDNSPR
FINKDFSFFVPENFPGFGEIGVISVTDADSGQNGWVALSVVNGSDIFVIDTGKGILRAKV
SLDREQQSSYVLWIEAVDGGDPALSSTAKITVLLLDINDNPPLVLFPQSNMSYLLVLPST
LPGSPITEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEEALMQNDYGLY
RLLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPDINIEEKLPQISIEPTH
KKIESASCVPTLVALSIISLGSITLVTGMGIYICLRKGKKPHSADENLEVQIPLNRRINL
HMLEKKPMEISNI
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgggacagccgcgccggcccgccagctccgccgcgcgcgggagcctgcagcatttattc
ctcgtcctgctcttcaccggccccttcaactgctttgccagctacagccgcgccactgag
ctcttctacagcctcaatgaggggctgccggccggagtgctcatcggaagcctggcaagg
gacctgcagctgcctggctgggcagcagaggaggagatgggggcagcactagcaatagcc
caggggccggcgctgagcttcagcctggcatcgcaggggctgggtggccagtatgtgagc
ctggacaaccgctcgggggagctgcacacgtcaacactggaaatcgaccgcgaggtgctg
tgtgcagaaaacggtgccggcacctcgccacccgcgccctcacctgaggcatgcctgctg
ctgctggatgtgctggtgctgccccaggagtacttccgcctggtgaaggtgaagattgcc
atccgcgatgtcaatgacaatgccccgcgcttccccgtgccccacatccgcctctgggtg
cctgagaacgcaccggtcaacacacgcctggccatcgagcacccagccctggaccctgat
gtgggcaccaacggtgtccagacctaccgcctgcgggacgactatggggtcttcacgctg
gacgtggaggagaatgagagtggggagaggaccccctacctcattgtcatgggtgccttg
gacagggaggccaggggcgagtacgtcaccctcatcttcgcagaggatgggggcactcct
ccgctggttggcagtgccaccctcaccgttggcatcagtgacgtcaatgacaactgcccc
cagttcggtgagtcccagctcaacgtcaccctatgtgggaattccagcactggggcccgc
gtggccactgtccatgctctggatgcggacttgggttccaatgcccagatcacctactcc
tacagccagaaggtcccacagccttccaaagacttgttccacctggatgaaagcaaaggc
attgttgaactctccaggaagattgatggtgatactccccggctccaccggttgatcatt
ttggccaacggtcctgggtgcatccctgctgtgatcactgtcctagtgtccatcatcaaa
gtcatgatgagacctccagaggtggtccctcgtttcatagctaatgaagtagacggggta
gtttacttgaaagaattggagcctgtaaacactccaattgcattttttaccataaaagac
ccagatgaaaaatacaaagttgattgctacttagatggtgatgggccattcagattgacg
ccatataaaccgtacaataatgaatatctgttagagactacaaagcctttggactatgag
gtacagcagctctatgaaatatcagtggttgcatggaactcagagggatttcacgtcaac
aaaataattaaagtgcaagttctggatgataatgacaactcaccagttttctctcaacaa
ttaatagaattatccattgaggaaaacaatgtccccaatgctttcttggccaaattgcat
gcaacagatgctgacagtggagagagagggaaagtgtcctattatctagggcctgatgct
ccatcctattttgctttagataaaaccactggagttcttacagtttccacccagctggac
agagaggaaaaagagaaatacaggtacactgtcaaggcagtagattctggattgcccccc
cgagaatcaatagctactgtcaccatcacagtactggataaaaatgacaatagtcctaga
tttatcaataaggatttcagcttttttgtaccagaaaactttccaggttttggtgaaatt
ggagttatcagtgtcacagatgctgattcagggcaaaatggatgggttgccctttcagtt
gtaaatggaagtgatatttttgtcatagatactggcaaaggcattttgagagctaaagtc
tctctggacagggagcagcaaagttcctatgtcctgtggattgaagctgtcgatggaggt
gatcctgctttgtcttctactgcaaaaataacagttcttcttctggacataaatgacaac
ccccctctggtcttgtttcctcaatctaacatgtcctatctgttggtacttccatctact
cttcctggctctcccatcactgaggtgtatgctgtagataaagacacaggcatgaatgct
gtcatagcttacagcatcataggtagaagaggtcctcgacctgaatcatttcggattgat
ccgaaaacgggtaatatcaccttggaggaggcactgatgcagaatgactatggtctgtat
cggctgcttgtgaaagtcagtgatcatggctacccagagccactccactctacagtcatg
gtaaacctttttgtcaatgacactgttagcaatgagagctatattgaaagtttgttaaga
aaggaacctgatatcaatatagaggaaaaactgccacaaatatctatagagcctacacat
aaaaaaatagagtcagcatcttgtgtgcctaccttagtagctctgtcaataataagcttg
ggatcaatcaccctagtgactgggatgggcatttacatctgtttaaggaaagggaaaaag
cctcacagtgcagatgaaaatttggaagtacaaatcccactaaacagaagaattaaccta
cacatgttggagaaaaaaccgatggagatttcgaatatctga
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integrated database retrieval system
