Agrobacterium tumefaciens S33: AWN88_19010
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Entry
AWN88_19010 CDS
T04213
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
ata
Agrobacterium tumefaciens S33
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ata03016
]
AWN88_19010
03036 Chromosome and associated proteins [BR:
ata03036
]
AWN88_19010
Transfer RNA biogenesis [BR:
ata03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AWN88_19010
Prokaryotic type
AWN88_19010
Chromosome and associated proteins [BR:
ata03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
AWN88_19010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
FAD_binding_2
Pyr_redox
AlaDh_PNT_C
HI0933_like
DAO
NAD_binding_8
NAD_binding_9
FAD_binding_3
Trp_halogenase
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AMD60291
LinkDB
All DBs
Position
linear:complement(1629607..1631490)
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AA seq
627 aa
AA seq
DB search
MHQSFDVVIIGGGHAGSEAAAAAARHGAKTALVTHKRDTIGVMSCNPAIGGLGKGHLVRE
IDALDGLMGRVADAAGIQFRMLNRKKGPAVRGPRTQADRRLYREAMQGEIANIENLTIIE
GDAFDIEMTNERVAAVVMANGSRIPCGSVVLTSGTFLRGLIHIGSEKVPAGRVGEEPSIG
LSNTLSRLGLRMGRLKTGTPARLDGRTIDWSGVDRQGADEDPVPFSFMTDNIVNPQIECG
IARTTSAGHRVIQENIHLSAMYSGQIEGVGPRYCPSIEDKITRFGERDGHQIFLEPEGLD
DHTIYPNGISTSLPASVQEQFIHTIPGLERVAILQPGYAIEYDYVDPRELKPSLECRKIA
GLFLAGQINGTTGYEEAAAQGLVAGLNASLYASNSDPHYFSRTESYIGVMIDDLTSKGVS
EPYRMFTSRAEYRLSLRVDNADLRLTPVGQRAGIIGYHRQKRFDNFIEELGSGRDLLRTL
TISPSQAAKQGLKLNQDGQRRSVYELLAYPDMSLDVLKQHWPELGGLPEKIADVLQIEAG
YAVYMQRQSADIVDIKRDEERKIPDDFDFQSLSGLSNELKQKLEKARPENIAQAARVDGM
TPAAISLLLALLRKSSPSQNEKLRLHQ
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagtcatttgatgtcgttattatcggtggtggacatgccggcagtgaagcggcc
gcggctgcggctcgccatggtgcaaaaaccgcgctcgtgacccataaacgcgacaccatc
ggtgtcatgtcctgcaatccagcaattggcgggcttggaaagggccatctcgttcgcgag
atcgacgccctggatggtttgatgggcagggtagctgacgctgccggtattcagtttcgc
atgctcaatcgcaaaaagggtccggcagtgcgcggtccccgcacccaggcggatcgccgt
ctttaccgtgaagcgatgcagggtgaaatcgcaaatatcgagaatcttaccattattgag
ggcgacgcttttgatattgagatgacgaatgagcgagtggctgctgtcgtcatggcgaat
ggtagccggattccctgcggttccgtggtactgacaagtggtactttcttgcgtggcctt
attcatatcggctccgaaaaggtaccggccggccgtgtgggtgaagaaccgtcaatcggc
ctttccaatactctgtcgcggcttggtcttcgcatgggtagacttaagaccggcacgcct
gcccgtctggacgggcgaacaattgactggagcggtgttgatcgacaaggcgcagacgaa
gatcctgtgcccttctccttcatgaccgacaatatcgttaatccgcaaatcgaatgtgga
attgccagaaccacatcagccgggcacagggtcattcaagagaatatccatctttcagca
atgtattcgggtcagatcgaaggcgtgggtccgcgttattgtccgtcgattgaagacaag
attacccgatttggcgagcgtgatggtcaccagatatttctggagcccgagggactggat
gatcatacgatctaccctaacggaatttcaacgtcacttccggcgtctgttcaggaacag
ttcatccacaccatacccggtctcgagcgggttgcgatcttgcagccgggttacgcgatc
gagtacgactatgtcgacccgcgagaactcaagccctccctcgagtgtcgcaagattgcg
ggactattccttgcggggcagatcaacggcacaaccggttatgaagaagcagctgctcag
gggctcgtcgccggcctaaatgcctctctttatgcaagcaacagcgatccgcattatttc
agccggacggaatcctacatcggcgtcatgatcgatgatctgacatccaagggtgtcagc
gaaccctaccgaatgtttacgtcaagagcggaatataggctgtcgttacgagtcgataat
gccgatctgcggctaacgccagtcggtcagcgggcgggaatcatcggttatcaccgtcaa
aagcgattcgataattttatagaagaacttggttcgggtcgtgacctgctgaggaccctc
acgatcagcccttcgcaggcagcaaaacagggattaaagctcaatcaggacggacaacgc
cgctccgtttatgaattgcttgcctatcctgatatgtcgcttgatgtcctcaaacagcac
tggcccgagttgggtgggcttcccgagaaaattgcggatgtgctgcaaatcgaggctggt
tacgctgtgtatatgcagcgccagagcgccgacatcgtggacatcaaacgcgacgaagag
cgaaagattcctgacgatttcgattttcaaagcctgtccggcctttccaatgagttgaaa
caaaagttggaaaaggcccgtccagaaaacattgcccaagccgcacgtgttgacggtatg
acgccggctgcgatatcgctgcttctcgcccttctgcggaaaagctctccatcgcagaat
gaaaaattgcgtctgcaccaatag
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