Atopobium sp. oral taxon 416: J4859_02650
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Entry
J4859_02650 CDS
T07170
Name
(GenBank) GIY-YIG nuclease family protein
Organism
atb
Atopobium sp. oral taxon 416
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Paralog
Gene cluster
GFIT
Motif
Pfam:
T5orf172
MUG113
ResIII
OmpH
Seryl_tRNA_N
Mod_r
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QUC03873
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Position
486225..489365
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AA seq
1046 aa
AA seq
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MSANDFFPQRPDDKPIIYAYREPGNRELKGLLKVGYTSRSIEERMHEHYPTLKPGERPYK
VVFTAPAMRSDGTTFMDHEVHANLEANGFRRMRDRDGKKTEWFRCTVSDVKAAYIAVRDR
SENVERRTRDFRMRPEQEAAVHKTEEYFRSVEEEGGTHTPKFLWNAKMRFGKTFATYELA
KDMHFTRVLVLTFKPAVQSAWEEDLATHVDFEGWQFVSRPKEPGRPNIAEQYEAADKSRP
IVCFGSFQDFLGRERDGRIKPQHEWVREEDWDLVVFDEYHFGAWNENSKSLFEPEEEDEA
NTQEDMDTRVGHVNTGNEMDEGDLPIVTRFYLFLSGTPFRALNSGEFIEEQIFNWTYSDE
QRVKEAWPRKHPGQPNPYESLPRMVMLTYQMPEEIRRVALGGEYNGFDLNTFFEARGQGD
DAEFVLRDSVQKWLDLIRGSYKPSTVDDLKLGAEKPALPYADTRLLHVLNHTLWYLPRVN
SCYAMRNLLREPQNTFFHDYTVNVCAGPEAGVGEAALDRVRESMQDPLHSRTITLTCGKL
TTGVTVKPWCGIFMLTNMRSPETYFQAAFRVQSSWTIRNDAGETEIMKRECYVFDFALDR
SLRMVSDYSCRLKVDENVGPEEKVGEFINFLPVLAYDGSTMRPVSAADILDIAMAGTSAT
LLARRWESALLVNVDNDTLRRILANEDAMRALMSIEGFRNLNEDIETIVNRSDAIKKAKR
ERGDLTKKERKEISEEEKELKSKRKQIQEKLIKFATRIPVFMYLTDYREQTLKDVITQLE
PGLFKKVTGLTVKDFELLVSLGVFNDVLMNDAVYKFRRYEDSSLTYAGVDRHAGERVGLF
DTTLSDFEYMQMAQQESMVAPNGLATSPDARTSRGDRNVKDAASTLVKARSHETLTAAQA
PRRDWVLDALDDEGIDYVDRRAGGGCLWVPGGSSIEERLGPVIKRGAGFKYSTTGGRVTH
GRPAWWLKGYPEARDGEPDGPLVLKVELDALDVGDTVFHKAFGYGEVVNLSDKYVMVSFE
NDNHKKKPFRQFGFPSAFYQGLLRIV
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgccaacgacttcttcccacaacgacctgacgacaagccaatcatctacgcctac
cgagagcctggcaaccgtgagctcaagggactgctcaaggtcggctacacaagccggtca
atagaagagcgcatgcacgagcactacccgaccctcaaacccggcgagaggccctacaag
gtcgtgttcaccgcgcccgcgatgcgctccgacggtaccaccttcatggaccacgaggtg
cacgccaacctcgaggcgaacggcttccggcgcatgcgggaccgcgacgggaagaagacc
gagtggttccggtgcaccgtgtcagacgtcaaggcggcctacatcgcagtccgcgaccgt
tccgagaacgtcgagcgccgcacgcgcgacttcaggatgcgcccggagcaggaggcggcc
gtccacaagacggaggaatacttccgctcggtcgaggaggagggcggcacccatacgccg
aagttcctctggaacgcgaagatgcgcttcggcaagaccttcgccacctacgagctcgcg
aaggacatgcacttcacgcgcgtcctggtcctcaccttcaagcccgcggtccagtctgcc
tgggaggaggacctcgccacccacgtcgacttcgagggctggcagttcgtcagccgcccg
aaggagccggggaggcctaacatcgctgagcagtacgaggcggcggacaagtcgcgccca
atcgtgtgcttcggctcgttccaggacttcctgggacgcgagagggacggtcgtatcaag
ccccagcacgagtgggtgcgcgaggaggactgggacctcgtcgtcttcgacgagtaccac
tttggcgcctggaacgaaaactcgaaaagcctcttcgagcccgaggaagaggatgaggca
aacacgcaggaggacatggacacccgcgtgggccacgtcaacaccggcaacgagatggac
gagggcgacctgcccatcgtgacgcgcttctacctcttcctctcggggacgccgtttcgc
gccctcaactccggagagttcatcgaggagcagatcttcaactggacctactccgacgag
cagagggtcaaggaggcctggcccaggaagcatcccggacagccgaacccctacgagtcg
ctcccgcgcatggtgatgctcacctaccagatgcccgaagagattaggagggtcgcgctc
ggcggggagtacaacggcttcgacctcaacacgttcttcgaggcgaggggccagggcgac
gatgccgagtttgtgctcagggactcggtccagaagtggctcgatctcatccggggctcc
tacaagccctcgaccgtggacgacctcaagctgggtgcagagaagccggcgctcccatat
gccgacacgaggctgctgcacgtcctcaaccacacgctctggtaccttccccgcgtgaat
agctgctacgccatgaggaacctcctgcgcgagccgcagaacacctttttccacgactac
acggtcaacgtgtgtgccggccccgaggcaggtgtcggcgaggcggcgctcgacagggtg
cgcgagagcatgcaagacccgctgcactcgcgcacgataactctcacctgtggcaagctc
acgacgggcgttaccgtgaagccctggtgcggcatcttcatgctcacgaacatgaggagc
cccgagacctacttccaggcggccttccgcgttcagtcgtcctggacgatcaggaatgac
gccggcgagaccgagatcatgaagcgggagtgctacgtcttcgatttcgcgctcgaccgg
agtctgcgcatggtcagcgactacagctgccggctcaaggtggacgagaatgtcggcccc
gaggagaaggttggggagttcattaacttcctgccagtgctcgcctacgacggcagcacc
atgcgcccagtgagcgcggcggacatcctcgacatcgcaatggcaggcacgtctgcgacg
ctccttgcccgcaggtgggagagcgcgctcctcgtgaacgttgacaacgacacgctcagg
aggattctcgccaacgaggatgcgatgcgcgctctcatgagcatcgagggcttccgcaat
ctcaacgaggacatcgagaccatcgtcaaccgctccgacgccatcaagaaggcgaagcgc
gagagaggagacctcaccaagaaggagaggaaggagatctccgaggaggagaaggaactc
aagagcaagcgcaagcagatccaagagaagctcatcaagttcgcgacgcgcataccggtc
ttcatgtacctcacggattacagagagcagacgctcaaggacgtgatcacgcagctggag
ccgggtctcttcaagaaggttaccggcctcaccgtgaaggacttcgagctcctggtatcg
ctcggagtcttcaacgacgtgctcatgaacgacgccgtgtacaagttccgccgctacgag
gactcctcgctcacctatgcaggcgtcgataggcacgccggcgagcgcgtcggcctcttc
gacacgacgctctctgacttcgagtacatgcagatggctcagcaggagtccatggtggct
ccgaacgggctcgcaacatctcccgatgctcggacttcgcgaggggaccggaatgtgaaa
gatgcggcttctacattggtaaaggcgcgatcgcatgagacgctaacagctgcgcaggct
ccaagacgcgactgggttctcgatgcgcttgacgacgagggaatcgactacgtcgaccgt
cgcgcgggcggcggctgcctctgggtgcccgggggcagcagcatcgaggaacgccttggt
cctgtgataaagagaggtgcgggcttcaagtacagcacgacgggtggcagggtcacgcat
ggcaggcccgcttggtggctcaagggctaccccgaggcgcgcgacggcgaaccggatggc
ccgctcgtcttgaaggtggagctcgatgccctcgacgtgggtgacaccgtgttccacaag
gcgttcggttacggggaggtcgtcaacctgagcgacaagtacgtgatggtctccttcgag
aatgacaaccacaagaagaagccgttcaggcagttcgggttcccaagtgccttctatcag
gggctgctgaggattgtgtag
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integrated database retrieval system
