Acidovorax temperans: PQV96_01275
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Entry
PQV96_01275 CDS
T08827
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
atem
Acidovorax temperans
Pathway
atem00550
Peptidoglycan biosynthesis
atem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PQV96_01275 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atem01002
]
PQV96_01275 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
atem01011
]
PQV96_01275 (dacB)
Enzymes [BR:
atem01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PQV96_01275 (dacB)
Peptidases and inhibitors [BR:
atem01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
PQV96_01275 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
atem01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PQV96_01275 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
WCT26415
LinkDB
All DBs
Position
286371..287744
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AA seq
457 aa
AA seq
DB search
MPASAQPAGAPPLPPEVEAALARAKLPRESLSVLVADAQGGARTPPRLAHRAQVPVNPAS
VMKLVTTYGALEQLGPAYTWSTPVFVEGAVQGGSLKGNVYIQGQGDPKLVVERLWLLMRR
LQAQGIQVIVGDIVLDRSAFDVPEQDPGRFDGEPLRPYNASPDALLLNYKSSVMTFVPDA
PAGLAHIQYDPPLAGVQRPATVALAPPGADCGDWRGALRAELNDPLKVVFQGAYPAACGE
RVWPVAYPAPREFAARAVEGMWRELGGKLTGSVREGKVPAGLKPAFVSTSPALAEVVRDV
NKYSNNVMAQHVFLTLARQKNGVATLDGARETLRQWWQARFADVDAPVPDNGAGLSRDAR
ITAQALARMLQAAWASPVMPELVASLPIAGVDGTLRRSQSRSAAHLKTGSLRDVMAVAGY
VHAQSGRRYVLVAIVNHPNANAARPVLDALTDWAAKD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccagtgcacagcctgccggtgcgccgcccttgccgccggaggtggaagccgcc
ctggcccgcgccaagctgccgcgcgaatccttgagcgtgctggtggccgatgcgcagggc
ggtgcacgcacgccgccccggttggcgcaccgggcgcaggtgcccgtcaacccggcttcg
gtgatgaagctggtcaccacctatggagcgctggagcagctcggaccggcttacacctgg
agcacgccggtgtttgtggagggggcggtgcagggtggcagcctcaagggcaacgtctat
atccagggccagggcgaccccaagctggtggtggagcgcctgtggctgctgatgcggcgc
ctgcaggcgcagggcattcaggtcatcgtgggcgacatcgtgctcgaccgctctgccttt
gatgtccccgagcaagaccccggccgtttcgatggcgagcccttgcgcccctacaacgca
tcgcccgacgcgctgctgctcaactacaagtccagcgtgatgacctttgtgcccgacgcg
cctgccgggctcgcacacatccagtacgacccgccgctggccggggtgcagcgcccggcc
acggtggccctggccccgccgggggcagattgcggcgactggcgcggcgccttgcgcgcg
gaattgaacgacccgctcaaggtcgtcttccagggggcttaccccgccgcctgcggcgag
cgggtctggcccgtggcctaccccgcgccacgggagtttgccgcccgcgcggtggaaggc
atgtggcgcgaattgggaggcaagctcaccggcagcgtgcgagaaggcaaggtgcccgcg
gggctcaagccagcgtttgtcagcacctcgcccgcgctggccgaggtggtgcgcgatgtg
aacaagtacagcaacaacgtcatggcgcagcatgtttttctgaccctggcgcgccagaaa
aacggcgtggccacgctggacggtgcccgtgaaaccctgcgccagtggtggcaagcccgc
tttgccgatgtggacgcccccgtgcccgacaacggcgcgggcctgagccgcgatgcgcgc
atcaccgcccaggcgctggcgcgcatgctgcaggccgcctgggcctcgcccgtcatgcca
gagctggtggcttcgctgcccattgccggggtagacggcacgctgcgccgcagccagagc
cgcagtgctgctcacctcaaaaccggcagcctgcgagacgtgatggccgtggccggatac
gtgcacgcgcaaagcgggcgccgctacgtgctggtggccatcgtcaaccaccccaatgcc
aatgcggcccggcccgtgctggacgccctgacggattgggctgccaaggattaa
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