Acidovorax temperans: PQV96_19425
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Entry
PQV96_19425 CDS
T08827
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
atem
Acidovorax temperans
Pathway
atem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
atem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PQV96_19425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atem03400
]
PQV96_19425
Enzymes [BR:
atem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PQV96_19425
DNA repair and recombination proteins [BR:
atem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PQV96_19425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Glyco_hydro_47
AmyA-gluTrfs_C
Motif
Other DBs
NCBI-ProteinID:
WCT24196
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All DBs
Position
4136173..4136976
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AA seq
267 aa
AA seq
DB search
MFKLTSLNLNGIRSATSKGVESWIATTRPDCICVQEVKAQAADIATRFEVLAGLKGHFHF
AQKKGYSGVGIYTRHEPSEVVVGYNSPEFDAEGRYVELRFDTPSRKMSIVSAYFPSGSSG
EERQQAKFRFLAEFYPHLLQLKAQREFILCGDVNIAHQNIDLKNWRSNQKNSGFLPEERA
WMTKLLDTSGEGGGLVDVYRQLQPATTDTAYTWWSNRGQAYANNVGWRLDYHLATERIAA
LARTAAIYKDQKFSDHAPLTVEYDFAL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaattaaccagcctcaacctcaatggcattcggtccgccaccagcaaaggcgtg
gagagctggatcgccaccacgcggccggattgtatttgtgtgcaggaggtcaaagcccag
gctgcagatattgccacccgtttcgaagtgctggcggggctgaaaggccactttcatttt
gcgcagaagaagggttattcaggcgtgggtatctacacgcgccacgaaccttcggaagtg
gtggtgggctacaactcgcccgaatttgacgccgaaggccggtatgtagagctgcgcttt
gacacgccatcgagaaagatgtcgatcgtgagcgcctatttccccagcggctcctccggc
gaggaacgccagcaggccaagttccgcttcctggccgagttctacccccatctgttacaa
ctgaaggcacagcgagagttcatcttgtgcggcgacgtgaacattgcccaccagaacatc
gacctgaagaactggcgcagcaaccagaaaaacagcggtttcctgccggaagagcgtgcc
tggatgacaaaactgttagacacaagtggcgaaggcggcgggttggtggacgtttaccgt
cagttacaacctgcaacaaccgacacggcctacacatggtggagcaaccggggccaggcg
tatgccaacaacgtgggttggcggctggattatcacttggcgacggagcgaatcgcagca
ctagctcggactgccgccatctacaaggaccaaaagttttcagatcatgcgcctttgacc
gttgagtacgacttcgccctgtaa
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