Agrobacterium tumefaciens Ach5: Ach5_49040 Help Entry Ach5_49040        CDS       T03816                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism atf  Agrobacterium tumefaciens Ach5 Pathway atf03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:atf00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     Ach5_49040  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:atf03400]     Ach5_49040 Enzymes [BR:atf01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      Ach5_49040 DNA repair and recombination proteins [BR:atf03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      Ach5_49040 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-ProteinID:  AKC10667 UniProt:  A0AA86G208 LinkDB All DBs Position pAt:311611..312663 Genome browser AA seq 350 aa AA seqDB search MTKPPRSKPLLRDSEAPLRSKPRRKRNPAQPQLLFDPMPDRVEPALAQLKAHPPQGDQWS WELKWDGYRLAVHIEPTGVRILTRSGHDWTHRFPAIEQAARALGPATMIIDGEAVVLDDE GRPDFGLLQKSLGASGKTAGSRASDAILYAFDLIYLDGHDLRNIEYRSRRHLLEDTLKGH DGAIRLSETIDADPAILLEHVGSLGLEGIVGKHLDQPYRSGRTGDWVKIKCVGSEAFMIV GYEPSTASPAGFASLALAAYRGDELIHVGNVGTGFKEAEMIRLRKMLDKLRWKRKQPPVP FPEKSDIVWVEPTLIAEIEFRAWTADGKLRHASYKGLRERQDNADVYKLD NT seq 1053 nt NT seq  +upstreamnt  +downstreamnt atgacgaagccaccgagatcaaagccgctccttcgtgatagcgaagccccgctgcggtca aagccgcgtcggaagcgcaatcccgcacagccacagctgctgtttgatccgatgcccgat cgcgtcgagccggcgctcgcccaattgaaggcgcatcctccacaaggcgatcaatggagc tgggagctgaaatgggacggctatcgactggctgtccatatcgagccgactggggtccgc atcctcacgcgtagcggccatgactggacgcaccggtttccggcgatcgagcaggctgcc cgggcgcttgggccggcaacgatgatcatcgatggcgaggcagttgtgcttgacgatgaa gggcggccggatttcgggctgctgcagaaatcgttgggtgcctctggaaagactgctggc agccgagcttcggacgccatcctctacgccttcgatcttatctatctcgacggtcatgat ctgcggaatattgaataccgctcacgccgccatcttctcgaggatacgctgaagggacat gacggcgcgatccgcctttcggaaaccattgacgccgatcccgcgatcctgctggaacac gttggcagccttggtctcgagggcatcgtcggcaagcacctcgatcagccctatcgttcc ggccgcaccggcgactgggtgaagatcaaatgcgttgggagcgaagcgttcatgatcgtg ggctatgagccatcgacggcatcgcctgccgggttcgcctcgctggcgcttgctgcctat cgcggtgacgagctcattcatgtcggaaacgtcggtacaggttttaaggaagccgagatg atcaggctgcgcaagatgctggacaagctgcgctggaagcggaaacagccaccggtgccc tttcccgaaaaatcagatatcgtctgggtcgagccaacactgattgcagagatcgagttc cgggcgtggacggcggacggcaagctacgccatgcctcctacaaaggcttgcgggaacgg caagacaatgccgacgtttacaagctcgactag

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