Arabidopsis thaliana (thale cress): AT1G66730
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Entry
AT1G66730 CDS
T00041
Symbol
LIG6
Name
(RefSeq) DNA LIGASE 6
Organism
ath
Arabidopsis thaliana (thale cress)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
842991
NCBI-ProteinID:
NP_176845
TAIR:
AT1G66730
UniProt:
F4HPZ9
LinkDB
All DBs
Position
1:24884681..24892046
Genome browser
AA seq
1396 aa
AA seq
DB search
MASDSAGATISGNFSNSDNSETLNLNTTKLYSSAISSISPQFPSPKPTSSCPSIPNSKRI
PNTNFIVDLFRLPHQSSSVAFFLSHFHSDHYSGLSSSWSKGIIYCSHKTARLVAEILQVP
SQFVFALPMNQMVKIDGSEVVLIEANHCPGAVQFLFKVKLESSGFEKYVHTGDFRFCDEM
RFDPFLNGFVGCDGVFLDTTYCNPKFVFPSQEESVGYVVSVIDKISEEKVLFLVATYVVG
KEKILVEIARRCKRKIVVDARKMSMLSVLGCGEEGMFTEDENESDVHVVGWNVLGETWPY
FRPNFVKMNEIMVEKGYDKVVGFVPTGWTYEVKRNKFAVRFKDSMEIHLVPYSEHSNYDE
LREFIKFLKPKRVIPTVGVDIEKFDCKEVNKMQKHFSGLVDEMANKKDFLLGFYRQSYQK
NEKSDVDVVSHSAEVYEEEEKNACEDGGENVPSSRGPILHDTTPSSDSRLLIKLRDSLPA
WVTEEQMLDLIKKHAGNPVDIVSNFYEYEAELYKQASLPTPSLNNQAVLFDDDVTDLQPN
PVKGICPDVQAIQKGFDLPRKMNLTKGTISPGKRGKSSGSKSNKKAKKDPKSKPVGPGQP
TLFKFFNKVLDGGSNSVSVGSETEECNTDKKMVHIDASEAYKEVTDQFIDIVNGSESLRD
YAASIIDEAKGDISRALNIYYSKPREIPGDHAGERGLSSKTIQYPKCSEACSSQEDKKAS
ENSGHAVNICVQTSAEESVDKNYVSLPPEKYQPKEHACWREGQPAPYIHLVRTFASVESE
KGKIKAMSMLCNMFRSLFALSPEDVLPAVYLCTNKIAADHENIELNIGGSLISSALEEAC
GISRSTVRDMYNSLGDLGDVAQLCRQTQKLLVPPPPLLVRDVFSTLRKISVQTGTGSTRL
KKNLIVKLMRSCREKEIKFLVRTLARNLRIGAMLRTVLPALGRAIVMNSFWNDHNKELSE
SCFREKLEGVSAAVVEAYNILPSLDVVVPSLMDKDIEFSTSTLSMVPGIPIKPMLAKIAK
GVQEFFNLSQEKAFTCEYKYDGQRAQIHKLLDGTVCIFSRNGDETTSRFPDLVDVIKQFS
CPAAETFMLDAEVVATDRINGNKLMSFQELSTRERGSKDALITTESIKVEVCVFVFDIMF
VNGEQLLALPLRERRRRLKEVFPETRPGYLEYAKEITVGAEEASLNNHDTLSRINAFLEE
AFQSSCEGIMVKSLDVNAGYCPTKRSDSWLKVKRDYVDGLGDTLDLVPIGAWYGNGRKAG
WYSPFLMACFNPETEEFQSVCRVMSGFSDAFYIEMKEFYSEDKILAKKPPYYRTGETPDM
WFSAEVVWEIRGADFTVSPVHSASLGLVHPSRGISVRFPRFISKVTDRNPEECSTATDIA
EMFHAQTRKMNITSQH
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgattccgccggagccacaatctccggcaacttctcaaactccgacaactca
gaaaccctaaatctcaacactacgaaactctactcatcagcaatttcctctatctctcca
caattcccctcaccgaaaccaacatcttcatgtccttcaatccctaattcaaaacgaatc
cctaatactaacttcatcgtcgatctcttccgcctcccacaccaatcatcctccgtcgct
ttcttcctctcacatttccactccgatcactactccggtctctcctcttcctggtccaaa
ggaataatctactgctcacacaaaaccgctcgtctcgttgcagaaatccttcaagttcct
tcacaattcgttttcgctttacctatgaaccaaatggttaagatcgatggctctgaagtt
gtgttgattgaagctaatcattgtccaggagcggtacagtttttgtttaaagtcaaatta
gagagcagtggatttgaaaagtatgttcatactggagattttagattctgtgatgagatg
agatttgatccgtttcttaatggttttgttggttgtgatggtgtttttctcgatactact
tattgtaatcctaagtttgtttttccgagtcaagaagagtctgttggttatgttgttagt
gtgatagataagattagtgaggagaaggttttgtttcttgtagctacttatgttgttggt
aaagagaagattttggttgagattgctaggagatgtaagaggaaaatcgttgtcgatgcg
agaaagatgtcgatgttgtcggttttggggtgtggtgaggagggaatgtttactgaagat
gagaatgagagtgatgttcatgttgtggggtggaatgtgttgggtgagacttggccgtat
tttaggccgaattttgtgaagatgaatgagattatggttgagaaagggtatgataaggtt
gtaggttttgtgcctacagggtggacttatgaagtgaagcggaataagtttgcggttagg
tttaaagattcgatggagattcatcttgtaccgtatagtgagcattcgaattatgatgaa
cttagagagtttataaagttcctgaaacctaaaagagttattcctactgttggagttgat
attgagaagtttgattgcaaggaggttaataagatgcagaagcatttctctggattggtt
gatgagatggcaaacaagaaagattttttattgggtttctatcgtcagtcttaccagaag
aatgagaaaagtgatgtagatgttgtgtcacacagtgctgaggtttacgaagaggaagag
aaaaatgcatgtgaagacggtggagagaatgttccatcatctagaggacccatattgcat
gatacaactccaagtagtgattcaagattgctgataaaactacgtgattctttgcctgct
tgggtcactgaagagcagatgttagatctgattaagaagcatgctggtaatcccgtggat
atagtaagtaacttttatgaatatgaagcagagctttacaagcaagcctctcttcccacg
ccttccttgaataatcaggctgttttgtttgatgacgatgtaaccgacctccaacctaat
cctgtgaaaggcatttgtccagatgttcaagcaattcaaaaaggttttgacttaccaaga
aaaatgaatttaacaaagggtactatttctcctgggaagagaggcaaaagctcgggcagt
aagtcaaacaagaaggccaagaaagatccaaaatcaaaaccagttggtccagggcagcca
acactttttaagtttttcaataaggtcttagatggtggatctaattctgttagtgttggt
tcagagactgaagaatgcaatacagataaaaagatggtccacattgatgcttcagaagca
tacaaagaagtgacagatcaatttattgatattgttaacggttctgaatctttaagagat
tatgctgcttccatcattgatgaggctaaaggagatataagtagggcactgaacatctat
tatagcaaaccccgtgaaatacctggtgaccatgcaggtgagagaggactctctagcaaa
acaattcagtatccgaaatgttcagaagcatgctcctctcaggaggacaaaaaggcttca
gaaaattcaggacatgcagtcaacatatgcgtgcagacatcagcagaggaaagtgtagac
aagaattatgtatctctacctcctgaaaaatatcaacctaaagagcacgcttgttggagg
gagggacagcctgctccatatatccaccttgtccgaacatttgcttctgttgaaagtgaa
aagggaaagatcaaagctatgtctatgctttgcaacatgtttagaagcttgtttgctctc
tctccagaagatgttctgcccgctgtttatctttgcacaaataagattgccgctgaccat
gagaatattgagcttaacattggtggaagtctaatctcttctgcattggaagaagcatgt
ggaataagtcggtctactgtgagagatatgtataatagcttgggggatcttggggatgtt
gctcagctatgtcgacaaacgcaaaagctactggttcctccacctccacttctagttaga
gatgtgttttcaactctacgaaagataagtgtgcagacaggtactggaagtactaggcta
aagaaaaatctcatcgtgaagctaatgcgctcttgtagagagaaagagatcaaatttctt
gttagaacattggcccgtaatttaaggattggcgctatgttgagaactgttctacctgca
cttgggcgagcaatcgttatgaattctttctggaatgaccataataaagaactatcagaa
agctgtttcagggagaaacttgagggtgtttctgctgcagtagttgaggcttacaacatt
cttccatctctggacgtggttgttccttctctcatggacaaagacattgagttttcaacg
tcaactctgtcaatggtcccagggatacctataaaacccatgcttgcaaaaattgctaag
ggggttcaagaattttttaacctctcccaagaaaaggcctttacttgtgaatacaaatat
gatggccagcgcgcccagatccataagttacttgatggtactgtgtgtatcttttctcgg
aatggggacgaaacaacgtccagatttccggatctggttgatgtcataaaacagttttct
tgccctgccgctgagacattcatgttggacgcagaggtggttgccactgatagaataaat
ggaaacaaactcatgtcattccaagagttatcaacaagagagagagggagcaaagatgct
ttgataactacagaaagtattaaggttgaagtctgcgtcttcgtgtttgatattatgttt
gtcaatggagaacagctgttggctcttcccctccgtgagagacgaagacgtctaaaggag
gtcttccctgagactaggccaggttatcttgagtatgctaaggaaataactgtgggagca
gaagaagcgtctctgaataatcatgacacattgagtaggataaatgcttttcttgaagaa
gcatttcagtcatcttgtgaaggaatcatggtcaagtctttagatgtaaatgctggatac
tgccccacaaagcgctctgattcatggctcaaggttaagcgagattatgtagatggattg
ggcgatacattggatttagttcctattggtgcttggtatggcaatgggagaaaagcagga
tggtatagtccattccttatggcctgcttcaaccctgagactgaagaattccagagtgtc
tgccgtgtcatgtctggtttttctgatgccttttacatcgagatgaaagaattctactcg
gaggataagatccttgcgaaaaagccgccttactacagaacaggggagacacctgacatg
tggttttccgcagaggtagtttgggaaatcagaggtgctgatttcacagtctcgcctgtt
cacagtgccagtttaggtctcgtccatccatcgcgaggcatctctgttaggtttccgaga
tttatcagtaaagtgacagatagaaatcctgaagaatgtagtacggctacagatatcgca
gagatgtttcatgctcaaaccagaaaaatgaacatcacttctcaacattaa
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integrated database retrieval system