Arabidopsis thaliana (thale cress): AT2G16880
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Entry
AT2G16880 CDS
T00041
Name
(RefSeq) Pentatricopeptide repeat (PPR) superfamily protein
Organism
ath
Arabidopsis thaliana (thale cress)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR_1
PPR
PPR_3
PPR_long
MRP-S27
Mtf2
DUF1955
ELK
Motif
Other DBs
NCBI-GeneID:
816189
NCBI-ProteinID:
NP_179280
TAIR:
AT2G16880
UniProt:
Q9ZVX5
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Position
2:complement(7312051..7314576)
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AA seq
743 aa
AA seq
DB search
MATLKPPESQLLKTLTSILTSEKTHFLETLNPYIPQITQPLLTSLLSSPSLAKKPETLVS
FFQWAQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLH
PNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYP
SSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDN
VTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL
MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL
SLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYH
TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKR
GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA
MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG
LCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR
FTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIA
YSDVIDELCSRGRLKEHSRSYTS
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcgactttaaagccacccgaatctcaattactaaaaaccctaacatcaatcctcaca
tcagagaaaacccatttcctcgaaaccctaaatccctacattcctcaaatcacacagcct
ctccttacctctctcctctcttctccttcactcgctaagaaaccagaaaccctagtatct
ttcttccaatgggctcaaacttcaatccccgaagcatttccatcggattcacctcttcca
cttatctccgtcgtccgttctcttctctctcaccacaaattcgccgacgccaagtctctt
ctcgtctcctatatccgcacctccgatgcatctctctctctttgcaactctctccttcac
ccgaatcttcatctatcacctccaccttctaaagctctattcgacattgctcttagtgct
tatcttcatgagggaaagcctcacgttgcgttacagatcttccagaagatgattcgatta
aagcttaagccaaatctgctcacttgcaatactcttctcattggtttagtcaggtaccct
tctagcttctctatctcaagtgctagagaagtgtttgatgatatggttaagattggtgtt
tcgctaaatgtgcaaactttcaatgttttggttaatgggtattgcttggaaggtaagctt
gaggatgctttaggaatgttagagaggatggttagtgaattcaaggttaatcctgataat
gttacttacaatacgattttgaaagcaatgtctaagaaaggtcgtttgagtgatcttaag
gaattgttgttggatatgaagaagaatggattggtgccaaatagggttacttataataat
ttagtgtatggttactgtaagttaggttcgttgaaagaagcatttcagattgtggagctg
atgaagcaaactaatgtattaccggatctttgtacctataacattttgatcaatgggctt
tgcaatgcggggagtatgagggaaggtcttgaattaatggatgcgatgaagagtttgaag
ttacagcccgatgtggttacttacaatacattgattgatgggtgtttcgaattggggctt
agtttggaggctaggaagttgatggagcaaatggaaaatgatggagtcaaagctaaccaa
gtgactcataatatctctcttaagtggctttgtaaggaagagaaaagggaagcggttact
agaaaggttaaggaattggtggacatgcacgggttttctcctgatatagtaacttatcat
actctgattaaagcgtatttgaaagtaggagatttgagtggtgcccttgagatgatgcgt
gagatggggcaaaaagggattaagatgaatactattacccttaataccattcttgatgct
ctatgtaaggagaggaaacttgatgaggctcacaatttgctgaatagtgcgcacaaacga
ggatttattgttgacgaggttacttatggcacattaatcatgggattcttcagggaagaa
aaagtggagaaagctttggagatgtgggatgagatgaagaaggtaaagattactcctaca
gtgagcacgttcaactctttaattggaggtctctgtcaccatggaaaaactgagctagca
atggagaaattcgatgagcttgctgagagtggtttgcttcctgatgacagtactttcaat
tcaatcatcctcggatactgcaaagaaggacgagttgagaaagcattcgagttttataat
gaatccatcaaacactctttcaagcctgataactatacatgcaacattctcctcaatggt
ctttgtaaggaaggtatgacagaaaaggctctcaatttcttcaacacgctaatagaggag
agagaggttgatacagttacatacaacacgatgatctcggctttctgcaaggacaagaag
ttaaaagaagcatatgaccttctatcagaaatggaggagaaaggactagagcctgatcgg
tttacatacaacagttttatcagtttgcttatggaagatggtaagctgagtgaaacagat
gaattgttaaagaaattttccggaaagtttggatcgatgaagcgggatttacaggtagag
acagagaaaaatccagcaacaagtgaatcaaaggaggaacttaacactgaagctattgct
tattcagatgtaatagatgaactttgtagtagaggaagattaaaggagcattctagatct
tacactagttga
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