Arabidopsis thaliana (thale cress): AT3G06400
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Entry
AT3G06400 CDS
T00041
Symbol
CHR11
Name
(RefSeq) chromatin-remodeling protein 11
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
AT3G06400 (CHR11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT3G06400 (CHR11)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT3G06400 (CHR11)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
AT3G06400 (CHR11)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
AT3G06400 (CHR11)
RSF complex
AT3G06400 (CHR11)
WICH complex
AT3G06400 (CHR11)
B-WICH complex
AT3G06400 (CHR11)
NORC complex
AT3G06400 (CHR11)
BRF complex
AT3G06400 (CHR11)
NuRF complex (fruit fly)
AT3G06400 (CHR11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
Myb_DNA-binding
HDA2-3
DBINO
CHDII_SANT-like
AAA_14
DUF1509
Motif
Other DBs
NCBI-GeneID:
819814
NCBI-ProteinID:
NP_001189827
TAIR:
AT3G06400
UniProt:
Q8RWY3
A0A178VF59
LinkDB
All DBs
Position
3:1940907..1946980
Genome browser
AA seq
1056 aa
AA seq
DB search
MARNSNSDEAFSSEEEEERVKDNEEEDEEELEAVARSSGSDDDEVAAADESPVSDGEAAP
VEDDYEDEEDEEKAEISKREKARLKEMQKLKKQKIQEMLESQNASIDADMNNKGKGRLKY
LLQQTELFAHFAKSDGSSSQKKAKGRGRHASKITEEEEDEEYLKEEEDGLTGSGNTRLLT
QPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGP
HMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMAI
KEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALL
NFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETI
LKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYT
TGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNT
GGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRA
HRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVR
YGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIQFKMDDSADFYDFDD
DNKDENKLDFKKIVSDNWNDPPKRERKRNYSESEYFKQTLRQGAPAKPKEPRIPRMPQLH
DFQFFNIQRLTELYEKEVRYLMQTHQKNQLKDTIDVEEPEEGGDPLTTEEVEEKEGLLEE
GFSTWSRRDFNTFLRACEKYGRNDIKSIASEMEGKTEEEVERYAKVFKERYKELNDYDRI
IKNIERGEARISRKDEIMKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFMICMIH
KLGYGNWDELKAAFRTSSVFRFDWFVKSRTSQELARRCDTLIRLIEKENQEFDERERQAR
KEKKLAKSATPSKRPLGRQASESPSSTKKRKHLSMR
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaattcgaattccgatgaggctttctcgtcagaggaggaagaagagcgggtt
aaggataatgaagaagaagatgaggaggagctcgaggctgttgctcgttcttctggctcc
gacgatgacgaagtagccgccgccgacgaatcaccagtctccgacggagaggctgctccc
gtagaagatgattacgaggacgaagaagatgaggaaaaagctgaaatcagcaaacgtgag
aaagccagacttaaagagatgcagaagttgaagaagcagaagattcaagagatgctggag
tcgcagaatgcttccattgacgcggatatgaacaataagggaaaagggagactgaagtat
cttctgcagcaaactgagttatttgcccactttgctaaaagtgatggatcttcttctcag
aagaaggcaaaaggaaggggacgtcatgcttccaaaataactgaagaggaggaagacgaa
gagtatctaaaggaagaagaggatggcttaactggatctggaaacacacggttactcaca
cagccctcttgtattcaagggaagatgagagattaccaattagctggtttgaactggctc
attcgtctttatgagaatggcataaatggaattcttgctgatgaaatgggtctggggaag
acgcttcaaacgatttctttgttggcatatcttcatgaatacaggggaatcaatggtccc
catatggtggttgctccaaaatcaacacttggtaattggatgaacgaaattcgccggttt
tgtcctgtcctacgtgctgtgaagttccttggtaatcctgaggagaggagacatattcga
gaagacctgctagttgctgggaaatttgatatttgtgtcacaagctttgagatggccatc
aaagagaagacagcacttcgtcggtttagctggcgttatattatcattgatgaagcgcat
cgaatcaagaacgagaattcactcctttctaaaaccatgagactttttagcaccaattat
cggcttcttatcacggggaccccccttcagaataatctccatgaactgtgggctcttcta
aattttcttctgcctgagatttttagttcagcagagacttttgatgaatggtttcaaatt
tctggtgagaatgaccagcaagaagttgtgcaacaactgcacaaggttcttcgaccattt
cttcttcgaagactaaagtcagatgttgagaaaggtttgccaccgaagaaggagaccata
cttaaagttggtatgtctcagatgcaaaagcaatactacaaggctttactgcagaaggat
cttgaagcggttaatgctggtggagaacgcaaacgtctgctaaacattgcaatgcaactg
cgtaaatgctgcaatcacccctatctcttccagggtgcagaacctggtcccccatatacc
acaggagatcaccttataacaaatgctggtaagatggttctcttggataaattgcttcct
aagttgaaagaacgtgattcaagggtgctgatattttctcagatgacaagacttttggat
attcttgaggactatttaatgtatcgtggttacttgtattgccgtattgatggaaacact
ggtggtgacgaacgagatgcctccatagaagcctacaacaagccaggaagtgagaaattt
gttttcttgttatctactagagctggagggcttggtatcaatcttgctactgcagatgtt
gtgatcctttacgatagtgattggaacccacaagtcgacttgcaagctcaggatcgtgcc
cataggattggtcaaaaaaaagaagttcaagtgtttcgattctgcactgagtctgctatt
gaggagaaagtgattgaaagagcttacaagaagttagcacttgatgctctggttattcaa
caagggagattggcagaacagaaaactgtcaataaggatgagttgcttcaaatggtaaga
tatggtgctgagatggtgttcagttctaaagatagcacaatcacagacgaggatattgat
agaatcattgccaaaggagaagaggcaacagctgaacttgatgctaagatgaagaaattc
acagaagatgctatacagtttaaaatggatgacagtgctgacttctatgattttgatgat
gacaataaggatgaaaacaagctcgattttaaaaagattgtaagcgacaattggaatgat
ccccccaagcgggagagaaagcgcaactactctgaatctgagtactttaagcaaacattg
cggcaaggtgctccagctaaacctaaagagcctagaattccgcgcatgccccagttgcac
gatttccagttctttaacattcagagattgaccgagttgtatgaaaaggaagtacgttat
ctcatgcaaacacatcagaaaaatcagttgaaagacacaattgatgttgaagaaccagaa
gaaggtggggatcccttaactactgaagaagtagaagaaaaggagggattattggaggag
ggtttctcaacatggagcagaagagattttaatactttcctcagggcttgtgagaagtat
ggccgcaacgacataaaaagcattgcctctgagatggaagggaaaacagaggaagaagtt
gaaagatatgccaaagtatttaaagagcggtacaaggagctgaacgactatgatagaatc
attaagaacattgagaggggagaggcaaggatctctaggaaagacgaaatcatgaaggcc
atagggaagaaactggatcgctacagaaacccttggctggaactgaagattcaatatggt
cagaacaaaggcaagctgtacaatgaagagtgtgaccgtttcatgatctgcatgattcac
aaacttggttatgggaattgggatgagctaaaggcagcatttaggacatcgtctgtgttc
aggtttgactggtttgtgaaatcccgcacgagtcaggaacttgcaagaagatgcgacact
ctgattcgactgatcgagaaagagaaccaggagtttgatgaaagagagaggcaagcccgc
aaagagaagaagctcgcgaagagtgcaacaccatcaaagcgacctttaggaagacaagca
agtgagagtccttcatcgacgaagaagcggaagcacctgtcgatgagatga
DBGET
integrated database retrieval system
