Arabidopsis thaliana (thale cress): AT3G54440
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Entry
AT3G54440 CDS
T00041
Name
(RefSeq) glycoside hydrolase family 2 protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00052
Galactose metabolism
ath00511
Other glycan degradation
ath00600
Sphingolipid metabolism
ath01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
AT3G54440
09103 Lipid metabolism
00600 Sphingolipid metabolism
AT3G54440
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
AT3G54440
Enzymes [BR:
ath01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
AT3G54440
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
Glyco_hydro_2
LacZ_4
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
824610
NCBI-ProteinID:
NP_001030858
TAIR:
AT3G54440
UniProt:
F4JCX0
LinkDB
All DBs
Position
3:complement(20148208..20157199)
Genome browser
AA seq
1108 aa
AA seq
DB search
MVSLATQMILPSENGYRVWEDQTLFKWRKRDPHVTLRCHESVQGALRYWYQRNNVDLTVS
KSAVWNDDAVQAALDSAAFWVDGLPFVKSLSGYWKFFLAPKPANVPDKFYDAAFSDSDWN
ALQVPSNWQCHGFDRPIYTNVVYPFPNDPPYVPEDNPTGCYRTYFQIPKEWKDRRILLHF
EAVDSAFFAWINGNPVGYSQDSRLPAEFEISDYCYPWDSGKQNVLAVQVFRWSDGSYLED
QDHWWLSGIHRDVLLLAKPKVFIADYFFKSKLADDFSYADIQVEVKIDNMQESSKDLVLS
NFIIEAAIFDTKNWYNSEGFSCELSPKVANLKLNPSPSPTLGFHGYLLEGKLDSPNLWSA
EQPNVYILVLTLKDTSGKVLDSESSIVGIRQVSKAFKQLLVNGHPVVIKGVNRHEHHPRV
GKTNIEACMVKDLIMMKEYNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDLS
GHLKHPAKEPSWAAAMLDRVVGMVERDKNHTCIISWSLGNEAGYGPNHSAMAGWIREKDP
SRLVHYEGGGSRTSSTDIVCPMYMRVWDIIKIALDQNESRPLILCEYQHAMGNSNGNIDE
YWEAIDNTFGLQGGFIWDWVDQGLLKLGSDGIKRWAYGGDFGDQPNDLNFCLNGLIWPDR
TPHPALHEVKHCYQPIKVSLTDGMIKVANTYFFNTTEELEFSWTIHGDGLELGSGTLSIP
VIKPQNSFEMEWKSGPWFSFWNDSNAGELFLTINAKLLNLTRSLEAGHLLSSTQIPLPAK
GQIIPQAIKKTDTSITCETVGDFIKISQKDSWELMVNVRKGTIEGWKIQGVLLMNEAILP
CFWRAPTDNDKGGGDSSYFSRWKAAQLDNVEFLVESCSVKSITDKSVEIEFIYLGSSASG
SSKSDALFKVNVTYLIYGSGDIITNWFVEPNSDLPPLPRVGIEFHIEKTLDRVEWYGKGP
FECYPDRKAAAHVAIYEHNVGDMHVPYIVPGENGGRTDVRWVTFRNKDGVGIYASTYGSS
SLMQMNASYYTTGELHRATHEEDLIKGQNIEVVHLDHKHMGLGGDDSWTPCVHDKFLIPP
AQYSFSLRLCPITASTSGLNIYKDQLPC
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgttagcgacccaaatgattcttccatctgaaaatgggtatagagtttgggag
gatcagacccttttcaaatggcgtaagagagatcctcatgtcaccttgcgttgccatgaa
tccgtccaaggggctttgaggtactggtatcagcggaacaacgtggatctcaccgtatca
aaatctgctgtttggaatgatgatgctgttcaagctgctcttgatagcgctgctttttgg
gttgacggcttgccctttgttaagtctttatctggttactggaagtttttcttggctcct
aaacctgctaatgttcctgacaaattttatgatgctgccttttctgattcagactggaat
gctttacaggttccttccaactggcagtgtcatggatttgatcggcctatctatacgaat
gtggtgtaccctttcccgaatgatcctccttatgttcctgaggataatcctactggttgc
tacagaacctacttccagattcccaaagaatggaaggacagaagaatacttcttcacttt
gaagctgtagactccgcattctttgcttggataaatggcaaccctgttgggtacagtcaa
gacagcaggttacctgctgaatttgaaatatctgattattgctatccatgggactcggga
aaacaaaatgttcttgctgttcaagtctttagatggagtgatggttcataccttgaagac
caagatcattggtggttgtctggtattcatcgagatgtgcttttgttagcaaagcccaag
gtcttcattgctgactactttttcaagtcaaaattggcagatgacttttcatacgcagac
atccaggttgaagtgaagattgacaatatgcaggagtcctcaaaggatcttgttctttct
aacttcatcatagaggctgccatatttgatacaaaaaattggtacaactctgaaggattt
agttgtgaactttctcccaaggtggctaatttgaagcttaatccttctccaagcccaact
cttggatttcatggttacttgcttgagggaaaactggattcgccaaatctctggtcagct
gaacaaccaaatgtttacatcctcgttttaactctaaaagatacatctgggaaagtcctt
gattctgaatcaagcattgtgggcattcggcaagtatcaaaggcctttaaacagcttctt
gttaatgggcacccagtcgtgataaaaggtgtaaacaggcatgagcaccatccacgtgtt
gggaagacgaatatagaggcatgcatggtcaaggatttaattatgatgaaagaatataat
atcaatgcggtgcgaaacagtcattatcctcaacatccccgctggtatgaattatgtgat
ttgttcggcatgtacatgatcgatgaagccaatatagagacacatggttttgatctctct
gggcatctgaagcaccctgcaaaagagccaagctgggcagctgctatgctggatcgagta
gttgggatggttgaaagagacaaaaaccatacatgcataatttcttggtcacttggaaat
gaggctggctatgggcccaatcattctgccatggcaggttggattagggaaaaggacccc
tcacggttggtgcactatgaaggtggtggttccagaacaagttctacagatatagtctgc
cctatgtacatgcgggtttgggacatcatcaagattgcacttgatcaaaatgaatcacgg
ccgttgatattatgcgagtatcaacatgctatgggtaacagcaacgggaatatagatgag
tactgggaggcaattgacaatacctttggcctgcaaggaggtttcatatgggactgggtt
gaccaggggctattgaaactggggtcagatggcattaagcgttgggcatatggaggggac
tttggtgaccagcctaatgatttgaacttctgtctcaatgggcttatatggcctgaccga
actcctcatccagcactccatgaggttaagcattgttaccaaccaatcaaggtttcattg
acggatggcatgataaaggttgcaaacacttactttttcaacacaacagaagaattggag
tttagctggacaattcatggggatggtcttgaacttggatctgggactctctctattcct
gtgataaagccacaaaatagttttgagatggagtggaagtcaggtccatggttttctttc
tggaatgactcaaatgctggagaattgtttctgacaataaatgccaagcttttaaatctt
actcgttcgcttgaagccggtcatcttttgtcttcaacgcagattcctttaccagcaaag
ggacaaataataccgcaggcgataaaaaagacagacactagtatcacttgtgaaactgtt
ggagatttcattaagatcagccagaaagattcatgggagctaatggtaaatgtccgaaaa
gggactattgaaggttggaagattcaaggagttctccttatgaacgaagctatactgcca
tgcttttggcgagcacctacagacaatgataaaggtggaggtgactctagttatttttcg
aggtggaaagcggcacagttagataatgtggagttccttgttgaaagctgttcagtaaag
agcatcactgataaatccgtagagatagagttcatttaccttggttcttcagcttctggc
tcttcaaagtcagatgccttattcaaagtcaatgtgacatatctgatctatggttccgga
gatatcatcaccaattggtttgtagaaccaaactctgatcttccaccgctaccacgtgta
ggtatagaattccacattgaaaaaacactggaccgtgtagaatggtatggcaaaggtcca
tttgagtgttacccagaccgaaaagcagcagcccatgtggcgatatatgaacacaatgtt
ggagacatgcatgtcccttatattgttccaggagaaaatggaggtagaacagatgttagg
tgggtaacattccgaaacaaagatggtgtaggaatatatgcttcaacatatggtagctct
tctctaatgcaaatgaatgctagttattatacaaccggtgagcttcaccgtgcaacgcat
gaagaggatcttatcaaaggacaaaacatcgaggtagtgcatctggaccacaaacacatg
ggtcttgggggagatgatagctggactccatgtgttcacgataagtttctgattccgcct
gcacagtattcgttttctctcaggctatgcccaattactgcatccacctcgggtttgaac
atctacaaggatcaactcccctgctag
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