Arabidopsis thaliana (thale cress): AT4G00450
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Entry
AT4G00450 CDS
T00041
Symbol
CCT
Name
(RefSeq) RNA polymerase II transcription mediator
Organism
ath
Arabidopsis thaliana (thale cress)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12
Motif
Other DBs
NCBI-GeneID:
827954
NCBI-ProteinID:
NP_001319832
TAIR:
AT4G00450
UniProt:
H3K2Y6
LinkDB
All DBs
Position
4:200874..211309
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AA seq
2235 aa
AA seq
DB search
MQRYHAANCTSAVNNSAIGGASARDSGRADSSSIGNYSLNSRRPPPLTPYKLKCEKDGLN
SRLGPPDFHPPTSNSPEENLTKEYVQFGYKETVDGLKESEEIILSQVHTFSKPVVHKCKE
AVRKCLRAINESRALKRKAGQVYGVPLSGSLLCKPGFPEQRSCGEETKKRWIESLSQQHK
RLRSLADNIPGYRRKTLFEVLIRNNVPLLRATWFIKVTYLNQVRPSPAAISSGTPDKTQA
SRCEQWTKDVIEYLQYLLDELLSRNSSFPAQQTRDRSPQMLYTGSMQKNSPASTSLYGEE
TSLHFKWWYMVRLLQWHHAEGLLFPNLIVDWVLKLLQEKEIFEILQLLLPIVYGVLESIV
LSQTYVQSLVAIAVRFIQEPAPGGSDLVDNSRRAYTLSALIEMVRYLVLAAPDTFVASDF
FPLPPSVAACGPNDVSYTSKAYENLEKLRSNSAEISAQFQGRGVLSRFEFLSFDYTISTI
QRSADDLAKIASAGYPQHNVAKAVQALDKALSDGDIRAAYSYLFEDLCNGAVDEAWITDV
SPCLRSSLRWIGAISTSFVCSVFFLIEWATCDFRDFRAGVPKDIKFSGRKDCSQVYLVIQ
LLKQKILGGEFTARKGKNCRNNFLGVSKPSGSMDAFESPGPLHDIIVCWIDQHEVHKGGA
KRLQLLVFELIRSGIFNPIAYVRQLIVSGMIDVIQPAVDPERRMRHHRILKQLPGCFVHE
TLEEAQLFGGDKLSEAVRTYSNERRLLLRELLVEKGKYWNNLVLSDQKSKKISTSLSSVI
FPRACNAKSNSKGPRKHTKSSVDIRELKERISALLQFPGMSCGVETPVRDEFQNSVKRSS
GSVYSKMDQPEATPGCEDCRRAKRPKMNDEKSSCYQGNSPIASDEEDNWWIKKGSKTVES
SLKVDPQIEITKQVPRGRQKMARKTQSLAQLQAARIEGSQGASTSHVCDNKVSCPHHGPG
VEGENQKVVDVFRTSTPVDMVSVGNSLKQLQFVDKRSIAVWLTTAVRQLVEEPQKSSVRV
GQFNRGAPVEEKNTIRWKLGADELYSILFLLDISLDLVSAVKFLLWLLPKANSTPSFAVQ
GGRNLVTVPRNVENNMCEIGEAILVSSLRRYENILLSADLVPEAMTALMNRAASLMSSNG
KISGSAALVYTRYILKRYGSLPSVVEWHNNFKATSEKKLLSELDHTRSGNGEYGNPLGVP
AGVDNPDDYLRKKISIGGARPSRVGLSMRDVLQRHVEEATHYLKKLIGTGTMKASLAEKN
DDGYQVAQQIVVGLMDCIRQTGGAAQEGDPSLVSSAVSAIINSVGLSVARITDFSLGNIY
QNHPSGVDSSNIARYILRIHITCLCLLKEALGERQSRVFEIALATESSTALTGVFAPVKG
SRGQHQLSPESYDSNANNSTIDMSNGTGKMALSRATKITAAVSALVIGSITHGVITLERI
VGLLRLKDYLDFVQFVRRTKSSSNGSARSMGASKVESPIEVYVHWFRLLVGNCKTVSEGL
VLELVGESSVVAISRMQRMLPLKLVFPPAYSIIAFVLWRPFVSNSNSNSSVHEDTHRLYQ
SLTMAFHDVIKHLPFRDVCFRDTQGLYELIVADSTDAEFASVFESHGLDMHLKSVAFAPL
RARLFLNSLIDCKVPSSGYSHEGVSEAKNRHQGNGTKLVDKLVSVLDCLQPAKFHWQWVE
LRLLLNEQALAEKLENHDMPLTDAIRSSCPTSEKPDASENEKNFIQILLTRLLVRPDAVP
LFSEVVHLFGRSVEDSMLKQAEWFLAGQDVLFGRKTIRQKLIIVGESKGLPTKPQFWKPW
GWCNSSSSDHITANKAGKKRKFEITSIEEGEVIEEGSGSRKVLLPRVLDENSPSVGYGIT
TERAFVQLVLPCIDQSSDESRSTFVNELVRQFSNIEQQLSSVTNRSTTSNKQMGTASSGS
EISSNKGSTRKGLRGGSPSLARRSSANTTDTSPPPSPAALRASMSLRLQFLLRLLPVICG
EPSFKNTRHALASTIVRLLGSRVVYEDYAVCSPRSELSKAETESTIDPSSMADLSSEVLF
DRLLFVLHGLLSNHQPKWLKPRPSSNESSKDFTLFDRDAAESLQNELSRMQLPDTIRWRI
QAAMPILLPSLRCSLSCQPHSVPPTALTLVQPSGSTAAAGTNQRNSPAISKSGTAAAQGK
LKPTMLAPHQQQEADNTDVVDPWTLLEDGTSSGLSSSNASNSSDMANLRATCWLKGAVRV
RRTDLTYVGSVDDDS
NT seq
6708 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggtatcatgctgccaactgcactagtgcagtcaacaatagtgctataggtggt
gcatccgcgagggactcaggacgagctgattcctcttcgattggaaactattcactaaac
tccaggagaccaccaccgttgacaccctacaagttgaagtgtgaaaaggacggtctgaat
tcccgattagggccgcctgattttcatcctccaacatcaaattctcccgaagagaatctg
accaaagagtatgttcaatttggatacaaggaaactgttgatggacttaaggaatccgaa
gaaattatattgtcccaggtccatactttctcaaagcctgttgtccataagtgcaaagag
gcagtcagaaagtgtcttagagctatcaatgaatctcgtgcactgaagcgcaaggctggt
caggtttatggggtgcctctctctggttcgcttctatgtaagcctggatttccagaacaa
aggtcatgtggggaggagacaaagaaaagatggatcgagagtttatcacaacagcacaaa
cgattgcgctctttggctgataacattcctggatataggagaaaaaccttatttgaagtc
cttataaggaacaatgtcccactattgagagctacttggtttataaaagtgacttatctc
aatcaggtgcgacctagtcctgctgctatttcttcaggaacacctgacaagacacaagct
tctcggtgtgagcaatggacaaaagatgttattgaatatttgcaatacctcttggatgaa
cttttgtcacggaatagctcatttcctgctcagcaaactagagataggtcaccacagatg
ctttatacaggatcaatgcaaaagaatagtccagcatcaacaagcctttacggcgaggaa
acatctctacattttaaatggtggtatatggtgcgtcttctacagtggcaccatgctgaa
gggcttctttttcctaatctcattgttgattgggttctcaagctcttacaggaaaaggag
atctttgaaattttgcagctgctactccccattgtgtatggtgttttagagagtattgtt
ctctctcagacatatgtacagagtcttgtagctattgctgtccgtttcattcaggaacct
gctcctggtggatctgatcttgttgataactctcgaagagcttatactctatctgctcta
attgagatggttcgctacttggtacttgctgcacccgacacatttgttgcttcagatttc
tttcctcttcctccttccgtagcagcatgtggacctaatgatgtgagctatacgtcaaag
gcttatgagaatctggaaaagctgagaagtaactctgcggagatttctgcccagtttcaa
ggaagaggagttctttcccggtttgagttcctttcttttgattataccatttcaaccatt
caaagaagtgcagatgatttggcaaagatagctagcgctggttaccctcaacataacgtg
gctaaagctgttcaggccttggataaagctttgtcggatggagatatcagagctgcttac
agttatctctttgaagacctttgcaatggagccgttgatgaggcctggattactgacgtc
agtccatgtttaagatcatcccttagatggattggcgctattagcacatcctttgtttgc
tccgtttttttccttatagaatgggctacatgtgattttagagatttccgtgctggtgtg
cctaaagatatcaagttctctggcagaaaagattgttctcaggtgtatttagtcattcag
cttctgaagcaaaagattctgggtggagaattcacagctcgcaaaggaaagaattgtcgc
aacaattttcttggtgtttctaaacctagcggttcgatggatgcatttgaaagcccgggc
ccattacatgatatcatagtctgttggattgatcagcatgaggtacacaagggaggagca
aagcgcttgcaattactcgtttttgaacttatacgttctggaatctttaatcccatagca
tatgtgaggcaactcatagttagcgggatgatcgatgtgattcaacctgctgttgatcct
gaaaggagaatgaggcaccatcgcatattgaaacagctacctgggtgttttgtacatgaa
accttagaggaagctcaactctttggaggggataagctttccgaggctgtgagaacttat
tctaatgaacggcgccttcttcttcgagaactgcttgttgagaaaggtaaatactggaat
aatttagttctctcagatcagaagtcaaagaaaatttccacttccctttcgtctgttatt
tttccaagggcgtgtaatgccaagagcaatagtaagggacctcgcaaacataccaagagt
agtgtggatattagagaactaaaggagcgcatatcagctctactgcagtttccaggtatg
tcatgtggtgtggaaaccccagtgcgagatgaattccaaaatagtgttaagagatcaagt
ggatctgtgtatagcaagatggatcaaccagaagctacaccagggtgtgaagactgtaga
agagcaaaaagaccaaaaatgaatgatgaaaagagctcttgctatcaagggaattcacca
attgcatcagatgaagaagataactggtggatcaagaaaggatcgaaaactgtggagtct
tctctgaaggttgatcctcagatagagataactaaacaagtaccacgaggtaggcagaag
atggcgcgtaagacacagtcgctggctcaactacaagctgctagaattgaaggtagccag
ggcgcttcaacgagtcatgtttgtgataataaagtaagctgtcctcatcatggccctgga
gtggaaggagaaaatcagaaggtggttgatgtgtttagaacttccacccctgtggatatg
gtatctgttggaaactctttgaagcagctacagtttgttgataagcgatctattgcagtt
tggcttactactgcagttcggcaacttgttgaagagccccaaaagagcagtgtgagagtt
gggcagttcaatagaggtgctccagttgaggagaagaacacaattaggtggaagcttggg
gcagacgagctatactccatattatttctcttggatatctctcttgacttggtttcagcg
gttaaatttcttctttggttattgccgaaggccaacagtaccccaagttttgccgtacag
ggtggaagaaaccttgtaactgtaccaaggaatgttgaaaacaacatgtgtgaaataggc
gaggcgattctagtatcatcactgagaaggtatgaaaacattctactttcagctgatctt
gttcctgaggccatgacagctttgatgaaccgtgctgcatcacttatgtctagtaatgga
aaaatttctggatcagcagccttagtttatactcgctatattttgaaaagatatggaagc
ctccccagtgttgtggaatggcataacaatttcaaagcaacatccgaaaagaagctactt
tctgaactagatcatacgcgatcaggaaatggtgagtatgggaaccccctcggggttcca
gcaggagtagataatccagatgactatttacgtaaaaaaatcagcattggcggtgcacgt
ccttcaagagtgggtttgagtatgcgagatgttttgcaacgacatgttgaagaggcgact
cattatctcaaaaaactcattgggactggtactatgaaagcctctctcgctgagaaaaat
gatgacgggtatcaggtggctcaacaaattgtagttggactaatggactgcattagacag
actggcggtgcagctcaagagggtgatccctctttggtttcttctgcggtttctgcgatt
ataaacagtgtaggcctttcagtggcaaggattacagatttctctttgggaaacatttat
cagaatcatccttctggcgttgattcatctaatattgcacgatacattttacgaatccat
ataacctgtctgtgccttcttaaggaagctcttggagagcgtcaaagccgagtgtttgaa
atagcacttgcaacagaaagttccactgcgcttactggagtttttgctcctgtgaaggga
tcacgaggtcagcatcagctatctcctgaatcctatgattcaaatgcaaacaattcaaca
atcgatatgtcgaatggtactggaaaaatggcgctgagcagagcgacaaaaattactgca
gctgtatctgcacttgttataggttctatcacacatggtgttataacccttgagaggatt
gttggtctactgagactaaaggattacttagatttcgttcagtttgtaaggcgtacaaaa
tcgagttctaatggcagtgctagatccatgggagcctctaaagtggaaagccctattgaa
gtgtatgtacattggttcagactccttgttggtaactgtaaaactgtttcggaagggctg
gttttggagcttgtgggagaatcttccgtggtggctatatcacgcatgcagcgtatgctt
ccgctgaaattggtcttcccaccagcctattcaattattgcgtttgttctgtggaggcct
tttgtttcaaatagtaactctaactccagcgtccatgaagacactcaccgcctttatcag
tctttgacaatggccttccatgatgttattaagcatcttcctttccgagacgtgtgcttc
agagacacccagggactttatgaactgatagttgctgattccacagatgctgaatttgcg
tcggtgtttgaatcgcatggattggatatgcacttgaaatctgtggcctttgctcctctt
cgagcgcgtcttttcttaaattccctaattgattgtaaggtgccatcctctggttattcc
catgaaggagttagtgaagcaaaaaaccgacatcagggaaatggaacaaagcttgtggac
aagcttgtatctgtattagattgcctgcagcctgcaaaatttcactggcagtgggttgaa
ctcaggctgcttctaaacgagcaagcacttgctgagaaactcgaaaatcatgatatgcct
ttgacagatgcaatacgatcttcctgtcctacctctgagaagcctgatgcctctgagaat
gagaaaaatttcattcaaatcctcctcacaaggttattggttagacctgatgcggtccct
cttttctcagaagtggttcatctcttcggtagatcggttgaggattcaatgttgaagcaa
gctgaatggtttctagcaggccaagatgttctttttggacgaaaaacaatcagacaaaaa
ctgattattgtaggtgaaagcaaaggactccccacgaaacctcagttttggaaaccttgg
ggttggtgcaacagctctagttccgatcatattacagcaaacaaggcagggaagaaaagg
aagtttgaaattacttctatcgaagaaggggaagtgattgaggaaggttcaggttcaaga
aaggtattattaccccgggtattggatgagaatagtcccagtgttggctatgggattaca
actgagagggcttttgttcagctagtgcttccatgcatagaccaaagctctgatgagtct
cgaagtacctttgtgaatgagttggtaagacagtttagcaatattgagcagcaattaagt
tcagttaccaaccgcagtacaacaagcaacaagcaaatgggaactgcttcttctgggtct
gagatttcatcaaataaaggaagtacccggaagggccttcgcggtggtagccctagtttg
gcaagaagatcctcagccaatactactgacacttcgccgccgccttcccctgctgctttg
agagcttctatgtctttgcggttgcaatttcttctaagattactgcctgtcatctgcggg
gaaccttcatttaagaacaccagacatgcacttgcgtctacaatagttcgtctacttgga
agcagagtagtttatgaagattatgctgtatgttctcctcgtagtgagctatcaaaggca
gaaacagaatcaacaatagatccttcttccatggcagatctctctagtgaagtcttattt
gaccggttactgtttgtactccatgggctgttaagcaatcaccagccaaaatggctaaag
ccaaggccttcctctaatgaatcatccaaagactttaccttgtttgatcgcgatgcagca
gagagcttacagaatgagctttcgcggatgcagttaccagacaccattagatggcggatc
caagcagcgatgccaatcctccttccttctctacgctgttctctctcatgccagcctcat
tctgttccgccaaccgcactcacacttgttcagccctctggatctactgctgctgctgga
accaatcaaagaaactcccctgccatatcgaaaagtggaactgcagcagcacaagggaag
ctgaagccgacaatgttggcaccacatcaacaacaagaagcagacaacacggatgtggtt
gacccgtggacgctcctcgaagatgggacaagttcaggtctatcaagcagcaacgcttca
aatagcagcgacatggccaaccttcgagccacctgttggctgaaaggtgcagtcagggtc
agacggactgatctaacttacgttggttcagtagacgacgacagctga
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integrated database retrieval system
