Arabidopsis thaliana (thale cress): AT4G17380
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Entry
AT4G17380 CDS
T00041
Symbol
MSH4
Name
(RefSeq) MUTS-like protein 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT4G17380 (MSH4)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Meiosis-specific proteins
Others
AT4G17380 (MSH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
827450
NCBI-ProteinID:
NP_193469
TAIR:
AT4G17380
UniProt:
F4JP48
LinkDB
All DBs
Position
4:9708684..9714135
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AA seq
792 aa
AA seq
DB search
MEDDGGERSSFVAGLIENRAKEVGMAAFDLRSASLHLSQYIETSSSYQNTKTLLRFYDPS
VIIVPPNKLAADGMVGVSELVDRCYSTVRKVVFARGCFDDTKGAVLIQNLAAEEPLALGL
DTYYKQHYLSLAAAAATIKWIEAEKGVIVTNHSLTVTFNGSFDHMNIDATSVENLELIDP
FHNALLGTSNKKRSLFQMFKTTKTAGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ
LFFGLSQVLRKFPKETDRVLCHFCFKPKKVTEAVIGFENTRKSQNMISSIILLKTALDAL
PILAKVLKDAKCFLLANVYKSVCENDRYASIRKKIGEVIDDDVLHARVPFVARTQQCFAL
KAGIDGFLDIARRTFCDTSEAIHNLASKYREEFNLPNLKLPFNNRQGFFFRIPQKEVQGK
LPNKFTQVVKHGKNIHCSSLELASLNVRNKSAAGECFIRTETCLEALMDAIREDISALTL
LAEVLCLLDMIVNSFAHTISTKPVDRYSRPELTDSGPLAIDAGRHPILESIHNDFVSNSI
FMSEATNMLVVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFATIRVVDRIFTRMGTMD
NLESNSSTFMTEMRETAFIMQNVTNRSLIVMDELGRATSSSDGLAMAWSCCEYLLSLKAY
TVFATHMDSLAELATIYPNVKVLHFYVDIRDNRLDFKFQLRDGTLHVPHYGLLLAEVAGL
PSTVIDTARIITKRITDKENKRIELNCGKHHEIHRIYRVAQRLICLKYSRQTEDSIRQAL
QNLNESFTEERL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacggaggagagagatcgagtttcgtcgccggcctaattgagaacagagcc
aaagaggttggaatggctgcttttgacctaagatcggcttcactgcatctatctcagtat
atagagacaagcagctcataccaaaacacgaagacgctgttgcgtttctatgatccttct
gtgataattgttcctcccaacaaattggcagccgatggcatggttggggtatcggaactg
gtggatagatgttatagcaccgttaggaaggttgtgtttgcccgtggctgttttgatgac
accaagggtgctgtgctaatacaaaacttggcagcagaagaacctttggcgcttggttta
gacacttactataagcagcattatctctcattggctgctgctgctgctacaatcaaatgg
atagaggcggaaaagggtgtgatagtcaccaaccactcactgactgtaacttttaatgga
tcgtttgatcacatgaatatcgatgcaactagtgttgagaatctggaactcattgatcca
ttccacaacgcacttttgggcactagcaacaaaaagaggagtttgttccagatgttcaag
acaacaaaaacagctggcgggactaggcttcttcgcgcaaacttgttacagcctctgaaa
gatattgaaactattaacactcgcctggactgcctggatgagttgatgagcaatgaacaa
ctattctttgggctttcacaagttttacgaaaatttccaaaagagactgatcgagttctt
tgtcatttctgcttcaagccaaagaaagtcactgaagcggtcataggttttgaaaatacc
agaaagagccaaaacatgatttcaagcattatcttacttaagactgcattggatgcttta
cctatacttgcaaaggttctgaaggacgcaaagtgttttcttcttgccaatgtttacaag
tcagtgtgtgaaaatgatagatatgcttccatcagaaaaaaaatcggggaagttattgat
gatgatgtcctccatgcacgggttccgtttgttgcccgtacacagcagtgttttgcttta
aaagccggaattgatggatttttggatattgcaagaagaaccttctgtgatactagtgaa
gcaatacataatctggccagtaagtatcgtgaggaattcaacttgccaaatttgaaactc
cctttcaacaacaggcagggattctttttcagaattcctcagaaggaagttcagggaaaa
cttccgaacaaattcactcaggttgtaaaacatgggaaaaacatacattgttcgagtctg
gaactggcttctttgaatgtcaggaataagtctgccgctggagagtgtttcattcgaacg
gaaacatgcttggaagcactaatggatgctataagggaagatatctctgccctcacactc
ctagcagaagtcttatgtctcctagatatgattgttaattcatttgctcatacaatatcc
acaaagccagtggatcgatactctagacctgaactaacagatagtggcccactggcaatt
gatgctggaaggcatcccatcctagaaagcatacacaacgactttgtttctaatagtata
ttcatgtcagaagcaaccaacatgttggtagttatgggtccaaacatgagcggaaagagc
acatatctccaacaggtgtgtctagtagtcattcttgctcagattggttgctatgtccca
gctcgctttgcaactataagggtggttgaccgcatatttacaagaatggggacaatggat
aaccttgagtcgaattccagcacgtttatgacggagatgagagagaccgctttcataatg
cagaatgtcaccaataggagtctgatagtcatggatgaactcgggagggctacttcttcc
tcagacgggttagcaatggcatggagctgctgcgagtatctcttatcactcaaagcgtac
acagtatttgcaacccatatggacagtctcgcagagttagcaaccatctacccaaatgtc
aaggttcttcatttttatgtagacatcagagataaccgcttagacttcaagtttcaactg
cgagatggaaccctacatgttccacattatggccttctattagctgaagtggcgggtctg
cctagtacagtgatcgatacagctaggatcataaccaaaaggatcacagacaaagaaaat
aaaagaatagagctaaattgtgggaagcaccacgaaatacatcggatctaccgagttgct
caaaggttgatatgcttgaaatactctagacagacagaagactcaattcgtcaagcactc
caaaatctgaatgaaagcttcactgaagaaagactctaa
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