Actinotignum timonense: CYJ17_0008960
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Entry
CYJ17_0008960 CDS
T09485
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
atim
Actinotignum timonense
Pathway
atim00521
Streptomycin biosynthesis
atim00523
Polyketide sugar unit biosynthesis
atim00541
O-Antigen nucleotide sugar biosynthesis
atim01100
Metabolic pathways
atim01110
Biosynthesis of secondary metabolites
atim01250
Biosynthesis of nucleotide sugars
Module
atim_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CYJ17_0008960 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CYJ17_0008960 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CYJ17_0008960 (rfbC)
Enzymes [BR:
atim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CYJ17_0008960 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WOS99929
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All DBs
Position
2135978..2136595
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AA seq
205 aa
AA seq
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MEIRELAIAGAWEITTKHFPDERGIFLEAYKSSVFEETIGHRLDVRQVNTSVSKAGTVRG
IHFADVPPSQAKYVMCPRGAVLDFVIDIRVGSPTFGKWDSVLLDDDTRKAIYISEGLGHC
FVALEDDSTVVYLCSAQYAPGREHGVNPLCSQVGLVFPETDRQGKKLELLLSPKDTDAPD
LDEAERSGLLPSYEDVQAFLATLRS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggagattcgggaattagcgattgcgggcgcatgggaaatcaccaccaagcatttcccc
gatgaacgcggtattttcttggaagcctacaaatcctctgtttttgaagaaacaatcggc
caccgtttggatgtgcgccaggtgaatacctcggtatccaaggccggcaccgttcgtggt
atccatttcgccgatgtgccgcccagccaggcgaagtacgtaatgtgcccgcgcggtgca
gttctcgatttcgttattgatattcgggtgggctcccccaccttcgggaagtgggattcc
gttcttctcgatgatgacacccggaaggcgatttatatttcggagggcctgggccactgc
ttcgtggccctggaagatgattccaccgtggtctacctgtgctcggcgcaatacgctccc
gggcgggaacacggggtgaatccgctgtgctcgcaggtgggcctggtattcccggaaact
gatcgccagggtaagaagcttgagctgctgctctccccgaaggataccgatgctcccgat
ctggatgaggccgaacgcagcgggctcctcccgagctatgaggatgtccaggctttcctc
gccaccttgcggagctaa
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