Actinocatenispora thailandica: Athai_68190
Help
Entry
Athai_68190 CDS
T07045
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
atl
Actinocatenispora thailandica
Pathway
atl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
atl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Athai_68190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atl03400
]
Athai_68190
Enzymes [BR:
atl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Athai_68190
DNA repair and recombination proteins [BR:
atl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Athai_68190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
Motif
Other DBs
NCBI-ProteinID:
BCJ39316
UniProt:
A0A7R7DWT9
LinkDB
All DBs
Position
complement(7397759..7398658)
Genome browser
AA seq
299 aa
AA seq
DB search
MTERVRVRVGDRELSLSNLDKPMFPDFTKGELIDYYTRIAPVLLPHLAGRPLTRKRYPNG
AAAGSFFEKNAPSHTPEWVRTVTLPVPGSTKDRETVDFVVVDELATLVWLANLAALELHV
PQWRVDAAGAAQPPDLIVFDLDPGPPAGLPECFAVALALRAELAADGIRAYPKTSGRKGM
QLMCPIAASQPAPVVSGYAKRLAHRLAQRDPDRVVDRMTRSLRPGKVFIDWSQNNAAKTT
VAPYSLRAGAAPLVSLPLHWAEVEAGRPVTGGPEAALSRVDSDGDLLAPLAEPGPPVPE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgacggagcgagtcagggtacgggtgggcgaccgggagttgtcgctgtccaatctggac
aagccgatgttcccggacttcaccaagggtgagctgatcgactactacaccaggatcgcg
ccggtgctgttgccgcacctggccggtcggccgctgacccgcaagcggtacccgaacggg
gcggcagcgggttcgttcttcgagaagaacgccccgtcgcacaccccggagtgggtgcgg
accgtgacgttgccggtgcccggctccacgaaggaccgggagacggtcgacttcgtcgtg
gtcgacgagctggccaccctggtgtggctggccaacctggccgcactggaactgcacgtt
ccacagtggagggtcgatgcggcgggtgccgcccagccgccggatctgatcgtcttcgac
ctcgacccgggcccgccggccgggctgcccgagtgcttcgcggtcgccctggcgctgcgc
gcggaactcgccgccgacgggatccgcgcgtacccgaagaccagtggccgcaaggggatg
cagctgatgtgcccgatcgcggccagccagccggcgccggtggtgtccggttatgcgaag
cgactcgcgcaccggctggcgcagcgcgacccggaccgggtggtggaccggatgacccgg
tcgctgcgaccgggcaaggtgttcatcgactggagccagaacaacgccgccaagaccacc
gtcgcgccgtactcgctgcgcgccggagccgcgccgctggtgtcgctgccgctgcactgg
gccgaggtggaggccggccggccggtgaccggcggaccggaggcggcactgtcccgagtg
gacagcgacggcgatctgctcgcgccgctggccgagccgggcccaccggtaccggagtga
DBGET
integrated database retrieval system