Amborella trichopoda: 18429538
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Entry
18429538 CDS
T02990
Name
(RefSeq) tryptophan synthase alpha chain
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
atr
Amborella trichopoda
Pathway
atr00260
Glycine, serine and threonine metabolism
atr00400
Phenylalanine, tyrosine and tryptophan biosynthesis
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
atr01230
Biosynthesis of amino acids
Module
atr_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
18429538
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
18429538
Enzymes [BR:
atr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
18429538
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Paralog
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Motif
Pfam:
Trp_syntA
His_biosynth
ThiG
PcrB
BtpA
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
18429538
NCBI-ProteinID:
XP_006838887
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All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MALIAQSIWVSLSTPKRSGYFHRSPHSLPALRVSMSSSLTAEQVTFTISGTFSSLKKQGK
VALVPYITAGDPDLETTGKALKILDSCGCDVIELGVPYSDPLADGPVIQAAATRALQRGT
NFSSIVSMLKEVVPRISCPIALFSYYNPILRLGIEKFILTIRDAGVHGLVVPDLPLEETE
TLRKESIKHGIELVLLTTPTTPTDRMKAICEASEGFVYLVSSVGVTGARASVNARVEALL
YEIQQATSKPVAVGFGISKPEHVKQVAAWGADGAIVGSAMVRILGDASSPEEGLKELESF
TKSLRAALP
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcattgcacagagcatttgggtttccctctcaactcctaaacgttctggatat
tttcatcgaagtccccattccttacctgctcttagagtgtccatgtcatcttccttgaca
gctgaacaagtgacctttaccatatcaggcaccttctcctctctgaagaaacaaggaaag
gtggctttagtaccttatatcacagcaggtgatcctgatcttgaaacaacgggaaaagca
ttgaaaattttggattcctgtggctgtgatgtaattgaactaggagtaccctactccgac
cctctagcagatggtccagtcattcaggctgctgcgacacgagctctacagcggggaacc
aattttagttctattgtttccatgctgaaggaggttgttcctcgtatatcttgtccaatt
gctttattttcctactacaacccaatactgagacttggtattgagaaattcatacttaca
ataagggatgccggtgttcatggacttgtggtgccggatcttccccttgaggaaactgag
acattgagaaaagaatctattaagcatggaattgagctggtactgctcacaacacccact
actccaacagatcgaatgaaagctatttgtgaggcttcagaagggtttgtataccttgta
agctctgttggtgtgactggtgctcgtgcctctgtgaacgcacgtgttgaggctcttcta
tatgagatccagcaggcaacaagcaaacctgtggctgtgggatttggtatatcaaaacca
gagcatgtaaaacaggtagcggcatggggggctgatggggcaattgttggcagtgccatg
gtgaggatattgggtgatgcaagctctccagaggaagggctcaaggaacttgagtctttt
accaagtctttaagagctgcattgccttag
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