Amborella trichopoda: 18433361
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Entry
18433361 CDS
T02990
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atr04040
]
18433361
Ion channels [BR:
atr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
18433361
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
18433361
NCBI-ProteinID:
XP_011622946
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All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MSHGMPKFVRFQDLSSERSSSGGKSFSSEHGLIGSISDRLHRGFEQGSQRIKTIGQSFHF
RGSQNSLKPSSESEKKVLDPQGKFLQTWNKIFVATCVLAVSVDPLFLYIPVISKDANCLD
LDNKLQTTACVLRFFTDIFYVVHIFFQFRTGFIAPSSRVFGKGILVEDSFAIAKRYLAPY
FIIDVLAVLPIPQVVILLIIPKLSGAVPLNTKNLLRFVILFQYIPRVIRIVPLYKEVIKA
SGLITETAWAGAAFNLFLYMLASHILGAFWYLLAIERLDACWRKECAPKGCLSSIYCGTE
QPTQNTSFLNAMCPMSLESTGGFDFGIYSPALSSAIVKSRDFPQKIFYCFWWGLRNLSSL
GQNLATSTYVWEIAFAVLIAIMGLVLFALLIGNMQTYLQSTTVRLEEMRVKRRDAEQWMS
HRMLPESLRERIRTYEQYKWLENRGVEEDVLIRNLPKDLRRDIKRHLCLGLLKRVPMFGT
MDDQLLDALCDCLKPSLFTKGSYIIREGDPVDEMVFIMRGRLETVTTNGGRTGFFNSDFL
KEGDFCGEELLTWALDPNSSSNLPSSTRTVKALSEVEAFALMADDLKFVATQFRRLHSKQ
LRHTFRFYSPQWRTWAACFVQAAWRRHCRKKIEESLHKEEDRLMRAAMARDGSTMSPSLG
AAVYVSRFAAIALRNARLGRRRVPDRTPLVRLQKPAEPDFGSDADS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacggaatgcctaaatttgtgaggtttcaagacttgagttcagagagatcctca
agtggggggaaaagcttttcttccgaacatggattaatagggtctatatctgacaggctt
catagaggctttgaacagggatcacaaaggataaaaaccattggccaatcctttcatttc
cgaggttcgcaaaattcattgaagccaagctcagagtctgagaaaaaggtacttgatcca
cagggaaaatttctccaaacatggaacaaaatattcgtggcaacatgtgtgcttgcagta
tctgtggaccccttgttcttatacattccagtcattagcaaggatgcgaactgtcttgat
ttggataacaagttgcaaactactgcttgtgtgttgcgcttcttcacggacatcttttat
gtggtgcatattttctttcaatttcgaactggattcattgccccttcctctcgagtcttt
ggaaaagggattttggttgaagattcttttgcaatagcaaaacgctacttggcaccatac
tttataattgatgttcttgctgttctaccaataccccaggttgttatcttgcttattata
cccaaattgagtggtgccgttccactgaataccaaaaacctgctgcggtttgttattcta
ttccagtatatacctagagtcattcgaatagttcccctgtacaaagaggttataaaggcc
tctggcctgataactgaaacggcatgggctggagctgctttcaatctatttctgtacatg
cttgcaagccatatacttggagcattttggtatttacttgcaattgaaaggctagatgct
tgctggagaaaggagtgtgcaccaaaaggatgcctgtcatctatatattgtggaacagaa
caaccaactcaaaatacctcattcctgaatgctatgtgccccatgtcacttgaatctacg
gggggttttgacttcgggatatacagcccagctcttagctctgctattgtcaaatctaga
gattttcctcagaaaatcttctactgcttttggtggggtcttcgaaatcttagttctctt
ggccaaaatttagcaaccagcacttacgtctgggagattgcatttgctgttttaattgcc
ataatgggcttggtgttatttgctcttctaattggcaatatgcagacatatttgcagtcc
actactgtaagattggaagaaatgagggtaaaacggcgagacgcggagcaatggatgtcc
catcgaatgctccctgaaagcttaagggaacgtatcaggacatatgaacaatataaatgg
ttggaaaacagaggggtggaagaagatgttttgattcgtaatcttccaaaggatcttaga
agggacataaagagacatctttgcttgggtttacttaagagagttcctatgtttgggacc
atggatgaccagttgctcgatgccttgtgtgactgcctgaagccatctctcttcaccaaa
ggcagctacatcatacgggagggtgatccagtcgatgagatggtcttcatcatgaggggg
agactagagaccgtcactaccaatggaggaaggactggttttttcaattctgatttcctt
aaagaaggcgacttctgtggtgaagagcttctcacttgggccttggaccctaattcatca
tctaatctcccttcctcaacaagaactgtaaaggccctttcagaggttgaggcctttgct
ctcatggccgatgacttgaagtttgtggccactcagtttagaaggcttcatagcaagcag
cttcgccatactttcaggttctattctccacaatggaggacttgggctgcttgtttcgtt
caagctgcatggagaaggcattgtagaaagaagattgaggagtcattgcataaagaggag
gataggttaatgagagctgcgatggcgagggatggttcgaccatgtccccaagccttggg
gctgctgtttatgtgtcgaggtttgctgcgattgcacttcggaacgcgaggctggggcgc
aggagggtgccagataggaccccgctggtgaggctacaaaagcctgctgaaccagatttt
ggttcggatgctgatagttag
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