Amborella trichopoda: 18439299
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Entry
18439299 CDS
T02990
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atr04040
]
18439299
Ion channels [BR:
atr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
18439299
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
DUF6525
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
18439299
NCBI-ProteinID:
XP_006849531
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MAFHNKDELPMLDTRIEVLNDGGFDRERKRFSLSRCVSFSVDATPTPNSNEYVPMFHTGP
LRSSRKNPYLRSRDLIHTLRDNEGSQGTSRSNAVQAIEFPNDNGKTQESDKEKLDNSYDG
KNEHLLRSGPLGRCNDPFCTTCPSYYNIKATTQRWPYSSSKFELKFDSALYGDAKGWIRR
SFSDLSSKIPGVMNPHSKFVQQWNKFFVVCCFIAIFVDPLFFVLLWVQKDYNCMVLDWSL
ATAIAVVRSFTDFSYFLHMLLQFRVAYVAPESRIIGTGDLVDHPKKIVLHYLRGKFLIDL
FVVLPLPQIMILVVLPKYIGSSAANYAKNLLRATVLLQYIPRMCRFLPLLVGRSETGFIF
ESAWANFVINLLIFVLAGHVVGSCWYLLGLQRVNVCLRDACWKFINTSACFEFLDCGHGS
YLEKFKESSLWDSWKNNSVAAQCYDAKNGPFPYGIYGTAVPVTIESRIISRYIYSLFWGF
QQISTLAGNQVPSVFPWEVLFTMGIIGLGLFLFALLIGNMQNFLQSLGRRRLEMQLQRRD
VEQWMSYRRLPEDLRRRVRQSERFNWAATRGVKEDHLLENLPEDLQRDIRRHLFEVIQKV
RIFSAMDETTLDIICERLRQKLYIEGCEIQSDGGPIEKMVFIVRGKMESTGADGYVTALA
EGDVVGEELLTWWLEQSPSSKDKQKMRLMEHVLISRRKVKCISNVIAFVLRGSDLEEVPF
LFMRFLRNPEVIRIIRCQSPYWRALAATRIQVAWRYRKKWLNRGASKPTEIQ
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcttttcacaataaagatgaacttcccatgttggatactcgcattgaggtacttaat
gatggcggttttgaccgtgagaggaaacggtttagtctcagcagatgtgtgtcattctct
gtggatgctaccccaactcccaatagcaacgaatatgttcctatgttccataccgggcct
ttgagaagttcaagaaaaaatccatatttacgttcacgtgatcttatacatactcttcgt
gataatgaaggttcacagggaacttccagatcaaatgcagtacaagcaatagaatttccg
aatgataatggaaagacacaagagagtgacaaggaaaagctagataatagctatgatggg
aagaatgagcatcttctgaggtctgggcctttgggaaggtgcaatgatccattttgcaca
acatgtccttcatattataatattaaagcaacaacccagagatggccgtattcttcttca
aaattcgaacttaagttcgattctgcactttatggggatgctaaaggctggatcaggaga
tcattctctgacttaagttctaaaattcctggcgtaatgaatccacactccaagttcgtt
caacaatggaacaaattttttgttgtttgttgcttcattgcgatttttgtggacccatta
ttcttcgtacttctatgggtgcaaaaggactacaactgtatggttcttgattggtcctta
gcaaccgcaattgctgttgtgagaagtttcacagatttcagctatttcttacacatgctt
ctccagtttagggtggcctatgttgctccagaatcccgaattattggtactggtgattta
gttgatcacccgaaaaaaattgttcttcattatcttcgtggcaaatttttaattgatctc
tttgttgtgttacctcttccacagatcatgattctggttgtgttgcctaagtatatagga
tcctcggctgctaattatgcaaaaaatctgttacgagccactgttcttctccagtatatc
ccaagaatgtgtagatttcttccattgcttgttggtcgatctgaaactgggttcatattt
gagtcagcatgggcaaattttgtcattaaccttctcatttttgtcctggcggggcatgtg
gtgggttcctgctggtatctcctgggcttgcagagggttaatgtatgtttacgagatgct
tgctggaaatttataaacacttctgcctgctttgaattccttgactgtggtcatgggagc
tatctggaaaaattcaaagagtcatcactttgggatagctggaagaataattctgttgct
gcccaatgttatgacgctaaaaatggccccttcccatatggaatttatggaacagctgtt
cctgttactattgaatctagaattatctcaagatatatttattctttgttttggggtttt
cagcaaatcagtactctagcaggaaaccaagttcctagtgtttttccgtgggaagttctc
ttcacaatgggcataattggacttggcctcttcctctttgctttgcttattggaaatatg
caaaactttctacaatctctcgggcgaaggagattggaaatgcaattacagcgccgcgat
gttgaacaatggatgagttatcgacgtctgccagaggatttgaggaggcgtgtgcgacaa
tcggaaaggtttaattgggcagcaacacgtggtgtaaaggaagaccatcttcttgagaat
ctaccggaggatctacaaagagacatacggcgtcatctttttgaagttatccagaaggtt
cgaattttttcagcaatggatgagactaccttggatataatttgtgaaagattaaggcaa
aagctgtatatagagggatgtgaaattcaaagtgatggaggcccaattgagaaaatggtt
ttcattgtgaggggtaaaatggagagcactggggcagatggatatgtcactgccttagca
gaaggtgatgtggttggtgaggagcttcttacatggtggcttgagcaatctccttcgagt
aaggataaacagaaaatgcggctcatggagcatgtattaatttccagaagaaaagtgaaa
tgtatatcaaatgtcatagcttttgtgctccgaggttctgatctggaggaagttccattt
ctatttatgcgattcctaaggaaccctgaagttatacgaatcatcaggtgtcaatcacca
tactggagagcactagctgcaactcgcattcaagtggcatggagatacaggaagaaatgg
ttgaaccgaggggcaagcaagcctactgagatccaatga
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