Amborella trichopoda: 18440225
Help
Entry
18440225 CDS
T02990
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM isoform X2
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atr03032
]
18440225
03400 DNA repair and recombination proteins [BR:
atr03400
]
18440225
Enzymes [BR:
atr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
18440225
DNA replication proteins [BR:
atr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
18440225
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
18440225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
CCER1
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
18440225
NCBI-ProteinID:
XP_006850440
UniProt:
W1PW94
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MNGNNTPTDNVVSELLEMGFEFPIALAAIEAVGPSLYDAVDFILTGSCNVKFEPSSTQEH
LNNAYGTSSREACTSKNMQRSFDSKDHMKQALITDHLSSSVKLEKSEPLGSSDTLAGGFN
IAKSKCGPLHKPDMVQSSSIDYRKMLSVESSANDMTLNELPTEDLCSLKNDNSSFHSTHW
SQGQGIDSKWETKVNFLLKNYFGISSLKSFQKEALEAWLAHRDCLVLAATGSGKSLCFQI
PALLTGKVVVVVSPLISLMHDQCLKLSKQGVSACFLGSGQPDNSVEDKALNGKYNIVYIC
PETILRLIAPLRKLAETRGIALFAVDEAHCVSKWGHDFRPDYRRLSVLRKNFRTSSIRSL
EHDIPVMALTATATHHAREDIIKSLHMSKETKIVITSFFRPNLRFSVCHSRTSSVSSYQR
DFKELIATYSRSRIADADSKRKSIADTSDGDESSEDDVYDSNDEASSDKDNIDDGIEDNE
LSVDFLEDELDLQQNVDDIDVTCGEFNADHPVKDQALYNPDEVISDPVEPVEKFRVTQES
LGEGTTIIYVPTRKETVRLSGHLCKCGIRSAAYHAKLPKRHLRSVHEEFHRNNLEVVVAT
IAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLAECTLYADLSRVPTLLPSKR
DAEQAKNAVLMLSDCFRYGMATSCCRAKTLVKYFGEELISGQCFLCDVCVSGPPKLENLK
DAAAIFLQVAAAQYGLIEITKCSYSDAIYSQTARQKYLERPNFNMLMDKIWERAKGFSER
GKLWWRGLARMLEDKGYIREGDDLVRVSIKYPKPTELGMRFLEAKEDLYVYPEADMLLSL
QNPTTSTYASEWARGWANPEIRRQRIQSLKRKRGGRKKYPRKKKVDLKTVRGRLKAKLVK
KI
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaaacaatacaccaaccgataacgttgtcagtgaattgttagaaatgggattt
gaatttcccattgccctagcagctatagaagctgtgggcccatccctctatgatgcggtg
gacttcattttgactggttcttgcaatgtaaagttcgagccaagttcaactcaagagcac
ctgaacaatgcatatggtacttcatctagagaagcttgcacttccaagaatatgcagaga
tcatttgattctaaggatcatatgaagcaggctttgatcacagatcatctgagttcatca
gttaaacttgaaaaatctgaacctttaggtagttctgatactttagcgggtgggttcaat
atagcaaagtccaagtgtggacctctacataagcctgatatggtacaatcctcttctata
gattacagaaaaatgctctcagttgaatcatctgcaaatgatatgactctcaatgagctt
cctaccgaggatctatgttctctaaagaatgataactcgagttttcattctactcattgg
tcacaaggtcaaggcatcgattcaaaatgggaaacgaaagttaattttcttctgaaaaac
tattttggaatttcatccctcaaaagtttccaaaaggaggccttggaagcatggttagcc
catcgagactgtcttgttcttgctgcgacgggatctggaaaatcactttgctttcaaatt
cccgcattattgactgggaaagttgttgtagtagtttcaccgcttattagtttgatgcac
gatcagtgtttaaagttatccaaacaaggtgtgtcagcttgcttcttgggatctgggcag
cctgacaattctgtagaagataaagctctgaatggaaagtataacatagtctacatttgc
ccagagacaattttaagactaatcgcgccacttcggaaactagcagaaactcgtggaatt
gcactttttgctgtcgatgaagcgcattgtgtctccaaatggggccatgattttcggcct
gactacaggcggttatctgttttgagaaaaaatttcagaaccagtagtataagatcgtta
gagcatgatatccctgtgatggcactgactgctactgctacacatcacgcacgagaagac
atcataaaatccttgcacatgtcaaaggaaacaaagattgtgatcacttcattctttcgt
cccaatcttcgtttttcagtgtgccatagtagaacgtcatctgtatcatcttatcagagg
gatttcaaagaattgatagctacatatagtagaagcaggatagcggatgctgacagtaaa
aggaaatcaattgctgatacatctgatggagatgagagctctgaagatgacgtttatgat
tcaaatgatgaagcaagctcagataaagataatattgatgatggtatagaggacaatgaa
ttgtcagttgatttcttggaggatgaactagacctgcagcaaaatgtggatgatattgat
gttacctgtggcgagttcaatgcggatcatcctgtcaaagaccaggctttgtacaatcca
gatgaggtaatatctgatcctgttgaaccagtggagaaatttagagttacacaagaatct
ctaggagaaggtactactattatatatgtacctaccagaaaggagacagtaagattatct
gggcacctttgtaagtgcggtatcagatctgcagcttatcatgcaaagctaccaaaaagg
catttgaggagtgtccatgaagagttccatcgaaacaatctagaggtggttgttgcaaca
atagcttttggaatgggcattgacaagtcaaatgttcgtagaatcattcactatggctgg
ccacagagtttggaagcatactaccaagaagcaggtcgagctggaagagatggaaagtta
gctgaatgcactctatatgctgatctttcaagagttccaacacttctacctagtaaaaga
gatgcagaacaggcaaaaaatgcagtattgatgctgtctgattgcttcagatatgggatg
gctacatcatgctgtcgagctaaaacacttgtaaagtactttggagaagaacttatcagt
ggccagtgcttcttgtgtgacgtatgtgtctctggacctcccaaattggagaatcttaag
gatgcggctgccatttttttgcaggttgctgcagctcagtatggattaatcgaaatcacc
aaatgtagctattcagatgcaatttacagtcaaactgcaagacagaaatatttggagagg
ccaaatttcaatatgctcatggacaaaatatgggaacgggccaagggtttttctgagagg
ggtaaattatggtggcgaggccttgcacgcatgttggaagataaaggttacataagggaa
ggggatgatttggtccgcgtaagtataaaatatccaaaaccaacagagctgggaatgagg
ttcttagaagccaaagaagatctttatgtgtaccctgaagcagatatgcttctctctttg
caaaatccaacaacatcaacatatgcttcagaatgggctcgaggatgggccaatccagag
atccggcgccaacgtatccaaagcttaaagaggaagagaggcgggaggaaaaaataccca
agaaagaagaaagtagatttaaaaacagttagaggaagactcaaagcaaaactagtgaag
aaaatttag
DBGET
integrated database retrieval system
