Amborella trichopoda: 18444401
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Entry
18444401 CDS
T02990
Name
(RefSeq) plant UBX domain-containing protein 10
KO
K18726
FAS-associated factor 2
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18444401
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
18444401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBX
UBA_4
FAF1
Pannexin_like
TAP_C
CymA
MurD_N
Thioredoxin_7
CDC45
TAF4
DUF6739
Motif
Other DBs
NCBI-GeneID:
18444401
NCBI-ProteinID:
XP_006854636
UniProt:
U5D6Y6
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MVDPGIDDKVTYFQAITGVEDLALCQEILEAHGWDLELAVSSFTSTSEPSVTSSGLDGGP
SELGFAELGFRGETRVSNHGEEEFVPYPNSPGIVWKVVKLPFSLIRGSLGLISGAIGFGL
WAAGGAFSYSIGALRWALGSQGNERGEENSSFVSLSSGAVEARAFIDGFESEYGEFHPNF
AVLGFMESLGRSREAFKLLFVYLHSPDHPDTSAFCRDTLCAQPVVEFLNENFVCWGGSVR
SSEGFKMSNSLRASKFPFCAVVMAASNQRIALLQQIEGPKSIEVFIPILQKVVEESGTVL
VAARIEEEERRHDRRLREEQDAAYRAALEADQARERQRKEEQERLEREAAEAERKKKEEE
EALAKAARETAEKEAALERRRQEKALSLGAEPEKGPDVTEVLVRFPTGERKERRFHSSAT
IHSLYDYVDSLNCLNAEKYSLVTNFPRVVYGPDKFDLSLKVAGLHPQVSLYVQVEDS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcctggaattgacgataaagtaacctatttccaagcgattacaggggttgag
gacctcgctctatgtcaagagatccttgaagcccatggctgggatcttgaactcgctgtc
tcttcatttacttctacctctgagccctctgttacttcctctggtttggatggcgggccc
tcagaattagggtttgcagagctgggattcaggggtgaaactagggtttccaatcatgga
gaagaagagtttgttccatatcctaattctcctggtattgtatggaaggtcgtaaagctt
ccattttctctgatcagagggagtttaggattaatttcaggggcaattgggtttggttta
tgggcagcaggcggggctttctcgtactcgataggggctcttcgatgggctttggggagt
caagggaatgagagaggtgaggagaattcttcatttgtttctctttcttctggtgcagta
gaagctcgagcattcatcgatggttttgagagtgaatatggggaatttcaccctaatttc
gcagttcttgggttcatggaatcattaggaaggtctagagaggctttcaagctgttgttt
gtgtatttgcactctcctgatcaccctgatacttcagctttttgccgtgataccttgtgt
gctcagcctgttgtagagtttttgaatgagaattttgtttgttggggtgggagtgttagg
tcaagtgaaggtttcaagatgagtaacagtttgagggcttcgaagtttccattctgtgca
gtggtcatggcggcttctaatcagaggattgcgcttcttcaacagattgagggaccaaaa
tccatagaggtgtttattcccattcttcagaaagtagttgaagagagtggcacagtgctt
gttgccgctaggattgaggaagaagaaaggagacacgacagacgtttgagggaagagcag
gatgctgcatatcgtgcagcacttgaagctgaccaagctagggagcgccaaagaaaagaa
gagcaagaaagattggaaagagaggctgctgaagctgagagaaagaagaaggaagaagaa
gaggccttggccaaggcagcccgagagactgctgagaaagaagctgctctggaaagaagg
cgtcaggagaaagcgttgtcattgggtgctgaacctgaaaaaggaccagatgtgacagaa
gttcttgtacggttcccaactggagagcgcaaagagcggaggttccatagctctgcaaca
atccactctctttatgactatgttgattcattgaactgcttaaatgccgagaaatacagc
ctggttacaaatttccccagggttgtgtatggtccagataagtttgacttgtcattgaaa
gtggcaggtttgcacccacaggttagtttgtatgttcaggttgaggactcctaa
DBGET
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