Amaranthus tricolor (tampala): 130799282
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Entry
130799282 CDS
T09367
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130799282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130799282
Spliceosome [BR:
atri03041
]
Common components
Common spliceosomal components
SR proteins
130799282
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
130799282
NCBI-ProteinID:
XP_057518369
LinkDB
All DBs
Position
1:complement(3394104..3402357)
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AA seq
228 aa
AA seq
DB search
MSHFGRDGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYADEAQKAVERLDGRMVDGREIAVQFAKYGPNAEKIQKGKILEPVTRIKSPRRSH
RDDYGRYRDNRRSRSRSLDRYNRDRYRGSGRDRDHRRRSRSHSYTPDNHRGRGRGRDKDE
RSYRGRVVESASPRQSPSPRRSVTPRRSASPCSPCSRSRSPEKRNNDE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacttcggaagagatggtcctcccgacatcaccgatacttactctcttctcgtt
ctcaacatcacttttcgtactactgctgatgatttgtttccattgttcgataagtatgga
aaagttgttgacgttttcatccctagagaccgaaggactggtgattcgcgtggttttgcg
tttgttcggtataagtatgcggatgaggctcaaaaggctgtggagaggcttgatgggagg
atggtggatggtagagaaatagctgtccaatttgcgaaatatggtccgaatgcagagaag
attcaaaaaggaaagattttggagcctgttactaggattaaaagcccgagacgaagtcat
cgagatgattacggtagatatagagataacagaagaagtcgcagcagaagtttggatagg
tataatcgtgacaggtatcgtggaagtggaagagacagagatcatcgccgtcgaagtagg
agtcacagttatactcctgataaccatagaggtcggggtagaggtcgtgacaaagatgaa
agaagctatcgtggcagagtagttgaaagtgcctctccgagacaaagtccaagtcctcgt
agaagtgtcactccacggcgtagtgcttcaccttgtagtccttgctcaagaagtcgtagt
cctgagaaacgcaacaatgatgagtga
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