Aegilops tauschii (wheat D): 109734615
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Entry
109734615 CDS
T04345
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 12
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109734615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109734615
03036 Chromosome and associated proteins [BR:
ats03036
]
109734615
Enzymes [BR:
ats01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109734615
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109734615
mRNA degradation factors
5'-3' decay
Decapping complex
109734615
Chromosome and associated proteins [BR:
ats03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109734615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
EPL1
DUF6426
Motif
Other DBs
NCBI-GeneID:
109734615
NCBI-ProteinID:
XP_020149407
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MHHPRARYPPGYDYGGGRGGNGGGGGGGGGGGGGGGNQNYYGGRNPHPQHHDYQQQQQQH
AQRSSFPQQQQQHAQRNSFSQQQQQQHQQQQHQQWLRRDQAAAQESGEGAARTVARLDAV
DTSSQDWKAQLNIPAPDTRFRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEE
SIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPTRELALQTSQVCK
ELGKYLNIEVMVSTGGTSLKDDIMRLYQPVHLLAGTPGRILDLTKKGICMLNECSMLIMD
EADKLLAPEFQPSVEQLIRYLPASRQLLLFSATFPVTVKDFKQKYLPRPYVINLMDELTL
KGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHA
KMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSG
RFGHLGLAVNLITYEDRFNMYRIEQELGTEIKTIPPQIDLAEYCQ
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacccgagggcccggtacccgcccggctacgactacggcggcggccgcggcggt
aacggcggcggcggaggcggtggaggaggtggaggaggtggcggcgggaaccaaaactac
tacggcggccgaaacccgcatccccagcaccacgattaccagcagcagcagcagcagcac
gcgcagaggagctcgttcccgcagcagcagcagcagcacgcgcagaggaactcgttctcg
cagcaacagcagcagcagcatcagcaacaacagcaccagcagtggctgcggcgggaccag
gccgcggcccaggagtcaggagagggtgcggccaggacggtggcgcgactcgacgcggtg
gacacgagctctcaagattggaaggcacagttgaatattccagctccagatactcgtttt
aggacagaggatgttactgcaacgaaaggcaacgagtttgaagattattttttgaaacgt
gagctacttatgggaatatatgagaagggatttgaaaggccatctcctattcaagaagaa
agcattccaattgctctaactggaagtgatattcttgcaagagcgaaaaacggcactggg
aagaccgctgcattttgcattccagcacttgaaaagattgacccggagaaaaatgccata
caagttgttatattggtaccaacaagggaactagctctgcagacttcacaagtttgcaaa
gagcttgggaaatacttgaatattgaagttatggttagtactggaggaaccagcttgaag
gatgacattatgcgtttgtaccaacctgttcatttactcgccgggacacctggccgtata
ctggatcttaccaagaagggcatttgtatgctgaacgaatgttcgatgctcatcatggac
gaggcggacaagctgttagctcctgagtttcagccttctgtggagcaactcattcgatac
cttccagctagtcggcaactattgctgttttctgcaacctttcctgtaactgtcaaggat
tttaagcagaaatacctacctagaccttatgttattaatctgatggatgaactaacactg
aaaggaatcacacaatactatgcctttgtagaagaaaggcaaaaggttcattgtctgaac
acacttttttcaaagcttcaaataaatcagtctattatattttgcaactctgttaataga
gttgagctactggcaaagaaaatcactgagctcggctattcgtgcttctacattcatgct
aaaatgttgcaagaccaccgaaacagggtgtttcatgatttccgcaatggcgcttgcaga
aaccttgtttgcacagatctttttaccagaggaattgacattcaagctgttaatgttgtc
attaattttgacttccccaagactgctgaaacatatttgcatagggttggtcgttctgga
agatttggacaccttggtttggcggtgaacttaatcacttatgaggaccgtttcaacatg
tataggattgagcaagaacttgggacagaaataaaaacaatacctccacagattgacctg
gcggagtattgccaatga
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integrated database retrieval system
