Agrobacterium fabrum: Atu1080
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Entry
Atu1080 CDS
T00070
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00470
D-Amino acid metabolism
atu01100
Metabolic pathways
atu01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Atu1080 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Atu1080 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
atu01011
]
Atu1080 (alr)
Enzymes [BR:
atu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Atu1080 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
atu01011
]
Precursor biosynthesis
Racemase
Atu1080 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
AAK86889
UniProt:
P58736
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All DBs
Position
circular:complement(1071353..1072528)
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AA seq
391 aa
AA seq
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MTDDFEDSFPDNETDAFEQAPLRLTVDLGALADNWRDMKKRSGRARTAAVVKADAYGLGI
EDCGATLYHAGARDFFVATVAEGATLRSYAPEARIFVLSGIWQGQERQVFDNDLVPVLAS
EEQLSFWMATVAERGDHPCALHVDTGFNRLGLPLDDALFLADDVTRPASFDPVLVLSHLA
CADTPSSPMNRAQLESFRRVSAAFEGIESSLSASAGIFLGPDYHFDLTRPGIALYGGEAV
NDVANPMRPVAKAEARIIQIREAGEGQTVSYGSSFLLKRASRLAIASVGYADGYQRSLSG
SGIPLREMGHGGAYGVVNGHKVPVAGRVTMDLTIFDVTDVPANAIRAGDYIELFGPNVPV
DETARAAGTIGYEMLTGLGLRYERQYLVADD
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgacttcgaagacagctttcccgacaacgaaaccgatgcgttcgagcaagcc
ccgctgcgattgaccgtcgatctcggcgctctcgccgacaattggcgggacatgaagaag
cggtccggaagagcccgcacggccgccgtcgtcaaggccgatgcctatggtctcggcatc
gaggattgtggtgcgacgctttaccatgccggcgcgcgggacttcttcgtggcgacggtg
gccgagggcgcgacccttcgctcctatgctccggaagcgcgcatcttcgtattgtcaggc
atctggcagggccaggaacggcaggtgttcgacaatgatctggtgccggtgctggcctcc
gaggagcaactgtccttctggatggcgacggtcgccgagcggggtgaccacccctgcgcg
ctgcatgtggacaccggcttcaatcgcctcggcctgccgcttgatgacgcgctgtttctg
gccgacgacgtgacacggccggcgagtttcgacccggttctggtgctgtcgcatctcgcc
tgcgccgatacaccgtcctcccccatgaacagggcgcagctcgaatcattccgaagggtt
agcgccgccttcgaaggtatcgaatcaagcctttcggcatccgccggtatctttctcggt
cccgactatcatttcgacctcacccgccccggcatcgccctttatggcggcgaggcggtc
aacgatgtggccaacccgatgcggcccgtcgccaaggccgaggcccggatcatccagata
cgcgaagcaggcgaaggccagacggtgagctatggcagcagcttcctgctcaagcgcgca
agccggcttgccatcgcatccgtcggttatgcggatggctatcagcgttcgctgtccggc
tcgggcattcccttacgtgaaatgggccatggcggtgcatatggcgtcgtcaacggccac
aaggtgcccgtggccgggcgcgtgaccatggacctgactattttcgacgtcacggatgtg
ccggcaaatgccattcgcgctggcgactatatcgagctttttggccccaacgttccagtc
gatgaaaccgcacgggcggccggcacgatcggttatgagatgctgacggggctcggcctg
cgttacgaacggcaatatctggtagcggatgactga
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