Agrobacterium fabrum: Atu1200
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Entry
Atu1200 CDS
T00070
Symbol
dppD
Name
(GenBank) ABC transporter, nucleotide binding/ATPase protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
atu
Agrobacterium fabrum
Pathway
atu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Atu1200 (dppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atu02000
]
Atu1200 (dppD)
Transporters [BR:
atu02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Atu1200 (dppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_25
AAA_16
Mg_chelatase
SMC_N
NACHT
AAA_5
AAA_7
nSTAND1
AAA_29
CbiA
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AAK87002
UniProt:
A9CJD8
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All DBs
Position
circular:1192564..1193631
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AA seq
355 aa
AA seq
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MNIEGQTLANTALSPERAPLLEIEDLHVSVPTPNGRKFVISGLTLSVNAGEVVALVGESG
SGKSMTALSLMRLLPQGVEIDSGRISFAGRDILALSSSELDALRGADISMLFQQPQAMLD
PTSRVRTQVAEPLWIHRKMSRSAALNRVVDLLSDVGIPDPSARAQCFAHELSGGMAQRVM
IAAALSGNPQLLIADEPTTALDVTVQAQILRLLDDERRKRRLATLLITHDLSVVAAFADR
IAVMYAGRIVEEGPTQAILKAPQHPYTKALISCSLLTTDSEGQLLTIPGSSAQAHDMSCG
CRFHPRCALAKSAGMGGRCMATEPALNALPEGRKARCWAVGDDHADHDHSSHAVC
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgaagggcaaacgcttgccaacactgccctgtctcccgagcgcgcaccgctt
ctggaaatcgaggatctgcacgtttcggtgccgacgccaaatggccgcaagtttgttatt
tcgggcctgacgctttccgtcaatgccggtgaagtcgtcgctcttgtcggcgaatccgga
tcgggaaagagcatgacggctctgtcgctgatgcggcttctgccgcagggcgtggaaatc
gattccggccgtatttcctttgccggacgcgacattctcgctctttcatcctccgaactc
gatgcgctgcgcggcgccgatatcagcatgctgttccagcagccgcaggccatgctggac
ccgaccagccgggtgaggacgcaagtggccgagccgctctggatccatcgcaagatgagc
cgaagcgcggcgctgaaccgggtcgtcgatctcctgtccgatgtcggcattcccgacccc
tcggcgcgggcgcaatgtttcgcgcatgagctttccggcggcatggcgcaacgcgtgatg
attgccgcagcattgtcgggcaatccgcagctgttgatcgccgatgagccgacgacggcg
ctcgatgtcaccgtgcaggcacaaatcctgcgcctgctggacgatgaacgtcgcaagcgc
cggctggcaacgctactcatcacccacgatctctcggtcgtcgccgctttcgcggaccgg
atcgcggtcatgtatgccggccgcatcgtcgaggaggggccaacgcaggcgatcctgaag
gcgccgcagcacccctataccaaggcgctcatcagttgctccctgctgaccacggacagc
gagggacagttgttgacgatccccggctcaagcgcacaggcccatgacatgtcctgcggc
tgccggtttcatccgcgctgcgcgcttgccaagtcggcaggcatgggaggccgctgcatg
gcgaccgaaccggctttgaacgccttgcctgaagggcgcaaggcgcggtgctgggcagtc
ggcgacgatcatgccgatcacgaccattccagccatgcggtttgttga
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