Agrobacterium fabrum: Atu4413
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Entry
Atu4413 CDS
T00070
Symbol
rspD
Name
(GenBank) ABC transporter, nucleotide binding/ATPase protein (bacteriocin)
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
atu
Agrobacterium fabrum
Pathway
atu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Atu4413 (rspD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atu02000
]
Atu4413 (rspD)
02044 Secretion system [BR:
atu02044
]
Atu4413 (rspD)
Transporters [BR:
atu02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Atu4413 (rspD)
Secretion system [BR:
atu02044
]
Type I secretion system
Multiple protein transporter
Atu4413 (rspD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
nSTAND1
TB2_DP1_HVA22
Geminin
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AAK89026
UniProt:
Q7CUW2
LinkDB
All DBs
Position
linear:1553197..1554948
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AA seq
583 aa
AA seq
DB search
MRFHSANNNVRRFKGVFSGCVTAFIGIGLMSALVNILYLTGSLFMMEVYDRVLPSRSLPT
LVALFAIAAVLYAFQGLFDAIRGRLLVRISDRLDQVLSTKVYDAVIGLQLRLPVSGRQAQ
PLRDLDTIRSFLSGSGPTALFDLPWLPFYIAICFAFHFWLGVTALAGAAILTVFTLMTEL
VSRRPVEEAAQHASRRNRLIEATRRNADIIAVMGMASPLRDRWQTDNRAYVREQRSASDI
ASGFGVASKVLRMLLQSGILAVGAWLVINEQATPGIIIAGSILSARALAPVDLAIANWKG
FIAARQSRYRLEKTLALLPDAAMRLDLPAPQALLSVERVNAIPPEATEPVLQDIAFTLAA
GSGLGVIGASGSGKSSLARLLVGLWRPVKGAIRLDGATLDQWPPEALARHIGYMPQMIEL
LDGTIAENIASFDRQASPEKIIAAARAARIHDLVVSLPDGYSTDVGETGRQLSAGQKQRI
ALARALYGDPFLVVLDEPNSNLDSEGEDALTAAILGIRERGGVAIVIAHRPSALLAMDKV
LMLADGRQQAFGAKEEVLAKVLRPVGGSAGALKVVQTTEPGKV
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttcattctgccaataataatgttcgccggttcaagggtgttttttcaggttgc
gtgacagccttcatcggcatcggcctgatgagtgctctggtcaatattctctatctcacc
ggctcgctgttcatgatggaagtctatgaccgtgtgctgccgagccgaagcctgccgacg
ctggtggccctcttcgccatcgcggcggtgttatatgcgtttcaggggctgttcgacgcc
atacgcgggcgtttgctggtgcgtatctccgatcgtctcgatcaggtgttgtcaacgaag
gtgtatgatgcggtgatcggcctgcaattgcgcctgcccgtcagcggccgtcaggcccag
ccgcttcgtgatctcgatacgatccgctctttcctgtcgggaagcgggccgaccgcgctt
ttcgatctgccctggctgcctttttatatcgccatctgctttgccttccatttctggctc
ggcgttacggctcttgcgggcgcggccattctcacggtgttcacgctgatgacggagctt
gtctccaggcgtcccgtggaggaggccgcgcaacatgcctccaggcgcaaccggctgatc
gaagccacccgccgcaatgccgatatcatcgccgtcatgggcatggcctcaccgttgcgg
gatcgctggcagacggataatcgcgcttatgtgcgcgagcagcgttccgcaagcgatatc
gcctcgggtttcggtgtcgcgagcaaggtgctgcgtatgctgctgcaatccggcattctg
gccgtcggtgcctggctcgtcatcaacgagcaggcgacacccggtatcatcatcgccggc
tccatcctgtcggcgcgggcgctggcgccggtcgatctcgccattgccaactggaagggt
tttatcgcggcccggcaaagccgttatcggcttgaaaaaacactggcgctgctgccggat
gccgccatgcggctcgacctgcctgcaccgcaggcccttctatccgtcgagcgcgtcaac
gccattccgccggaagcgaccgaaccggttttgcaggatatcgcctttacgcttgcggcc
ggcagtggcctcggtgtgatcggggcgagcggatcgggcaagagttcccttgcgcgtctg
ctcgtcggtttgtggcggccggtcaagggtgcgatccggctggatggtgcgacgctggat
caatggccgccggaagcactggcacgccatatcggttacatgccgcagatgatcgagctt
ctggatggcaccattgccgaaaacatcgcctccttcgaccggcaggcgagtccggaaaaa
atcatcgcggcggcgcgggcggcccgtatccacgatctagtggtcagcctgccggacggt
tattccaccgacgtgggtgaaaccgggcggcaattatcggcggggcagaagcagcgcata
gcccttgcacgggcgctctatggcgatcccttcctcgttgtgcttgatgaaccgaattcc
aatctcgattccgaaggtgaggatgcgctgacggccgccattctcggcattcgcgagcgt
ggcggcgtggccattgtcatcgcccaccgcccgagcgcgcttctggccatggacaaggtg
ctgatgctcgccgatggccgtcagcaggcattcggcgccaaggaggaagtgctcgccaag
gtgctgcgcccggtcggcggttccgccggtgccctcaaggtcgtgcagaccacggaacca
ggaaaggtatga
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