Trichormus variabilis: Ava_0360
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Entry
Ava_0360 CDS
T00277
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ava
Trichormus variabilis
Pathway
ava00470
D-Amino acid metabolism
ava00550
Peptidoglycan biosynthesis
ava01100
Metabolic pathways
ava01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Ava_0360
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ava_0360
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Ava_0360
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ava01011
]
Ava_0360
Enzymes [BR:
ava01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Ava_0360
Peptidoglycan biosynthesis and degradation proteins [BR:
ava01011
]
Precursor biosynthesis
Amino acid ligase
Ava_0360
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ABA19986
CyanoBase:
Ava_0360
UniProt:
Q3MGA0
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All DBs
Position
463721..464824
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AA seq
367 aa
AA seq
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MSKLRVGLLFGGRSGEHEVSISSARAIASALSAGENASKYEILPFYIHKDGRWLAGEAPQ
QVLKSGAPLLESSNSSPADNNLVNSQQQTLERWQSPSQVAEVDVWFPILHGPNGEDGTIQ
GLLTLMQTPFVGSGVLGSALGMDKIAMKMAFEQAGLPQVKYKAVTRAQIWSNPCVFPKLC
DEIEASLGYPCFVKPANLGSSVGISKVRSRQELEDALDNAANYDRRIIVEAGVVAREVEC
AVLGNDQPQASTVGEITFNSDFYDYETKYTAGKADLLIPAVIPDEISRQIQDMALQAFAA
VDAAGLARVDFFYVEATGEVLINEINTLPGFTATSMYPQLWAYSGIPFPELVDKLVQLAI
ERHNPSH
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagttgcgggtaggattgttatttggcggtcgttctggagaacatgaagtttct
ataagttccgcacgggcgatcgcttcagccctaagtgcaggagaaaatgctagtaagtac
gaaatattgccgttttatatccacaaggatgggcgttggctagcaggagaagccccacaa
caggtactcaaatcaggtgcgcctctattggaatcgtcaaactcctcaccagcagacaat
aatctcgtaaactcccaacaacaaactctcgaacgttggcaatcaccttctcaagttgcg
gaagtagatgtgtggtttcccattctccacgggcctaatggtgaagatggcacaattcaa
ggtttgcttactctcatgcaaactccttttgtcggttccggcgttttgggttcagcactg
ggaatggataagatagcgatgaagatggcttttgagcaagctggactaccccaggtgaaa
tataaggctgtcaccagagcgcaaatttggtcaaatccctgcgtatttcccaaattatgc
gatgaaattgaggcgagcttaggttatccctgttttgtcaaaccagctaaccttggttct
tctgttgggatttctaaagtgcgatcgcgccaagaattagaagatgctttagataatgcc
gctaactatgaccgccgaattattgtagaggcgggagttgtagcaagggaagtagaatgt
gcagttttaggtaacgaccaaccccaagcttccaccgtgggcgaaattacctttaatagt
gacttttatgattacgaaactaaatatacggctggtaaagcagatttactgattcccgcc
gtgattcccgacgaaatcagccgtcaaattcaagacatggctttacaagccttcgcagct
gttgacgctgctgggttagccagagtagactttttctacgtggaagctacaggagaggtg
ttgattaatgagatcaacaccctaccaggtttcaccgctaccagtatgtacccccaactc
tgggcctatagtggcatcccctttccagaattggtggataagttagtccaactggcgata
gaaagacacaatcctagtcattag
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