Trichormus variabilis: Ava_3903
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Entry
Ava_3903 CDS
T00277
Name
(GenBank) ribulose 1,5-bisphosphate carboxylase small subunit
Organism
ava
Trichormus variabilis
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GFIT
Motif
Pfam:
RuBisCO_activase_AAA_helical
RuBisCO_small
AAA
Torsin
YbjN
Motif
Other DBs
NCBI-ProteinID:
ABA23508
CyanoBase:
Ava_3903
UniProt:
Q3M678
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Position
complement(4853884..4855128)
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AA seq
414 aa
AA seq
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MSYYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTL
ISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNT
QLVNATLMNIADNPTDVQLPGSYDSNPIRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEP
NRDDKVGIVGGIFAEDGLSKREIEQLVDTFPKQSIDFFSALRSRIYDEQIRDFIHQVGFE
RISLRVVNSVEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEYNRLNRGRGYQA
APPPEAPMIQPVNNSSHKRETSNTHLSLETQEQIRQILSQGHKITFEHVDARRFRTGSWQ
SCGTLHIDAESDAISTLEACLVDYEGEYVRLVGIDPKGKRRVVETIIQRPNDKN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagttattatatcgctccgcgctttctggataaacttgctgttcacatcaccaaaaac
tttttaaatattcctggtgtgcgagttcccttaattttagggattcatggacgtaaagga
gaagggaaaacctttcagtgtgagttagcttttgagaagatgggtattgaagtcacactc
atctccggcggtgaattggaaagtcccgatgcgggagacccagcccggttgattcggctg
cgctatcgggaaacggcagaactgattaaagtgcggggtaaaatgtgcgtgctgatgatt
aacgatttagatgcaggtgcaggacgctttgatgaaggtacgcaatatactgtaaatact
cagttggtaaatgccacactgatgaatattgccgataatcccacagatgtacagttaccc
ggtagttatgattccaacccgatacggcgtgtccccattatcgtgacaggtaatgatttt
tctactctctacgcaccattgattcgggatggacggatggagaaattctattgggaaccc
aaccgcgatgataaggtgggaattgtcggggggatttttgctgaggatggactctcaaaa
cgagaaattgaacaattagttgatactttccccaagcaatcgattgacttttttagcgct
ttacgttctcgaatttacgacgaacaaatccgcgactttatccatcaagttgggtttgaa
cgtatatctctacgtgttgtgaacagcgtagaagcgccgccagaatttaaaaagccagat
ttcagccttgctcatttgatcgagtctggtaacttggtgttgggtgaacaacaacgggta
gacaattctcagctagtggatgagtataatcgattgaatcgcgggaggggttatcaagca
gcgccaccgcctgaagcgcccatgattcagccagtcaataatagttctcacaagcgagag
acatctaatactcatttgagtttagaaacccaagaacaaatccggcaaatcttgtctcaa
ggtcacaaaattacttttgaacacgtagatgcacgccgcttccgcacgggttcttggcaa
agttgcggtactctgcatattgatgcagagtcagatgctatttcaacactagaggcttgc
ttagttgattatgagggtgagtatgtgcgcttggtagggatagacccgaaaggtaagcgg
cgggttgtggagacaattattcaacgaccaaatgacaaaaactaa
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