Trichormus variabilis: Ava_3905
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Entry
Ava_3905 CDS
T00277
Name
(GenBank) ribulose 1,5-bisphosphate carboxylase small subunit
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
ava
Trichormus variabilis
Pathway
ava00630
Glyoxylate and dicarboxylate metabolism
ava00710
Carbon fixation in photosynthetic organisms
ava01100
Metabolic pathways
ava01110
Biosynthesis of secondary metabolites
ava01120
Microbial metabolism in diverse environments
ava01200
Carbon metabolism
Module
ava_M00165
Reductive pentose phosphate cycle (Calvin cycle)
ava_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ava_3905
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
Ava_3905
Enzymes [BR:
ava01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Ava_3905
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Motif
Pfam:
RuBisCO_small
Guanylate_cyc_2
Motif
Other DBs
NCBI-ProteinID:
ABA23510
CyanoBase:
Ava_3905
UniProt:
Q3M676
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Position
complement(4856590..4856919)
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AA seq
109 aa
AA seq
DB search
MQTLPKERRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFNEASEPTEFYWTLWKLPL
FGAKTSREVLGEVQACRSQYPGHYIRVVGFDNIKQCQVLSFIVHKPSRY
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccttaccaaaagagcgtcgttacgaaaccctttcttacttaccccccctcacc
gacgttcaaatcgaaaagcaagtccagtacattttgagccaaggctacattccagccgtt
gagttcaacgaagcttctgaacctaccgaattttactggacactgtggaagctacctttg
ttcggcgctaaaacatctcgtgaagttttgggtgaagttcaagcttgccgttctcaatat
cctggtcactacatccgtgttgtaggatttgacaacatcaagcagtgccaagtcctcagc
ttcatcgttcacaaacccagcagatactaa
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