KEGG   Trichormus variabilis: Ava_3905Help
Entry
Ava_3905          CDS       T00277                                 

Definition
(GenBank) ribulose 1,5-bisphosphate carboxylase small subunit
  KO
K01602  
ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
Organism
ava  Trichormus variabilis
Pathway
Glyoxylate and dicarboxylate metabolism
Carbon fixation in photosynthetic organisms
Metabolic pathways
Microbial metabolism in diverse environments
Carbon metabolism
Module
Reductive pentose phosphate cycle (Calvin cycle)
Reductive pentose phosphate cycle, ribulose-5P => glyceraldehyde-3P
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:ava00001]
 Metabolism
  Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    Ava_3905
  Energy metabolism
   00710 Carbon fixation in photosynthetic organisms
    Ava_3905
Enzymes [BR:ava01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.39  ribulose-bisphosphate carboxylase
     Ava_3905
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
CyanoBase: 
CYORF: 
UniProt: 
LinkDB All DBs
Position
complement(4856590..4856919)
Genome map
AA seq 109 aa AA seqDB search
MQTLPKERRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFNEASEPTEFYWTLWKLPL
FGAKTSREVLGEVQACRSQYPGHYIRVVGFDNIKQCQVLSFIVHKPSRY
NT seq 330 nt NT seq  +upstreamnt  +downstreamnt
atgcaaaccttaccaaaagagcgtcgttacgaaaccctttcttacttaccccccctcacc
gacgttcaaatcgaaaagcaagtccagtacattttgagccaaggctacattccagccgtt
gagttcaacgaagcttctgaacctaccgaattttactggacactgtggaagctacctttg
ttcggcgctaaaacatctcgtgaagttttgggtgaagttcaagcttgccgttctcaatat
cctggtcactacatccgtgttgtaggatttgacaacatcaagcagtgccaagtcctcagc
ttcatcgttcacaaacccagcagatactaa

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