Trichormus variabilis: Ava_4154
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Entry
Ava_4154 CDS
T00277
Name
(GenBank) ABC transporter, substrate-binding protein, aliphatic sulfonates
KO
K15553
sulfonate transport system substrate-binding protein
Organism
ava
Trichormus variabilis
Pathway
ava00920
Sulfur metabolism
ava02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Ava_4154
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ava_4154
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_4154
Transporters [BR:
ava02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Sulfonate transporter
Ava_4154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMT1
NMT1_2
OpuAC
Phosphonate-bd
NMT1_3
SBP_bac_3
PBP_like
K-cyclin_vir_C
Motif
Other DBs
NCBI-ProteinID:
ABA23753
CyanoBase:
Ava_4154
UniProt:
Q3M5I3
LinkDB
All DBs
Position
complement(5180577..5181680)
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AA seq
367 aa
AA seq
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MLNFLFQRIITYWQKLFIFKFANQSRSISIVPIKFTGTFITGLCLSLLFAACTANNASNI
TTVSANNSTQSKASVVRIGYQKSAILLKSKGLLEKRLQPEGVSVEWNEFPAGPQLLEAMN
VGSIDFGHTGESPPIFAQAADAAITYIAGIIPSPANSAILVPKNSDIKTVNDLKGKKIAF
QKGSSAHYLLVQILEKNGLKYSDIQPIYLPPADARAAFVKGSIDAWSIWDPFYAAAEKSA
DARVLIDGTGINKQGGYYLASRKFANQQPEIIKAILEEIQNTEQWSDKNRNEVAATLSPI
LGIDLETMQRSTNRRKFGIRPITPELITLQQEVADKFYELKLIPKAIDVKEAMLTPAQYA
AFAPKNP
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgttgaattttctattccagcgcataataacctattggcaaaaattgtttattttcaaa
tttgctaatcagagtcgctcaatatctatcgttcctataaaatttactgggacatttatt
actggcttatgcctcagtcttttatttgctgcctgcacagctaataatgctagtaatatc
actactgtgtctgctaataattcaactcagagtaaagcatctgtagtcagaataggctat
caaaaatcagcaattctcttaaaaagtaaagggcttttagaaaagcgcttgcaacctgaa
ggagtatctgttgaatggaatgaatttcctgccggtccgcagcttttagaagcgatgaat
gtcggtagtattgacttcgggcatactggagaatcaccaccaatttttgctcaagcagcc
gatgctgcaatcacatatattgcgggaattatacccagtccagctaattcagcaattctt
gttcccaaaaattccgatatcaaaacagtcaatgatcttaaagggaaaaaaatcgctttc
caaaaaggttctagcgcccattatctgctagtgcaaattttagaaaaaaacggactgaag
tacagcgatattcaacccatatatctacccccagccgatgctcgtgccgcctttgtcaaa
ggtagcattgatgcttggtcaatttgggaccccttttatgcagcagccgaaaaatctgcc
gatgctcgtgtgttaattgatggcacaggaattaataagcagggaggatattaccttgct
agccgcaaatttgctaaccagcaaccagaaattattaaagcaatactagaagaaattcaa
aatactgaacaatggtctgataaaaatcgcaatgaagtagcagcaactctttctcctatc
ttgggcatcgatttggaaacgatgcaaagaagtactaacagaagaaaatttggcatcaga
ccaatcactccagaattaattactctccagcaggaagttgcagataaattctatgaacta
aaattaattcccaaagcaattgatgtcaaagaagcaatgcttacaccagcgcaatatgca
gcttttgcacccaagaatccataa
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