Trichormus variabilis: Ava_C0116
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Entry
Ava_C0116 CDS
T00277
Name
(GenBank) two component transcriptional regulator, LuxR family
Organism
ava
Trichormus variabilis
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_24
HTH_28
HTH_40
HTH_38
Xre-like-HTH
EutK_C
HTH_IclR
Sigma70_ECF
HTH_29
Motif
Other DBs
NCBI-ProteinID:
ABA25204
CyanoBase:
Ava_C0116
UniProt:
Q3M1D9
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Position
C:complement(138276..138905)
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AA seq
209 aa
AA seq
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MSQATTIRVLIADDHAIFRQGLATIINRDPEMQVIAQAENGEQAIAAFREHQPDVTLMDL
RMPEVEGVAAIGAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAI
RTVHRGQKYIPPDVGAKLVQRLSNPELSERELAVLRSLAQGMSNAEIAAALSIGEGTVKS
HVNRILNKLDVSDRTQAVIVAVKRGIVSL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagctacgaccattcgggttctaattgcggacgatcacgccatttttcggcaa
ggattagccacgattattaaccgtgacccagagatgcaggtgattgcacaagccgaaaat
ggggaacaagcgatcgccgcctttcgagaacaccaaccagatgtaacgctaatggatctg
cgaatgcctgaagtggaaggagttgccgccattggtgcaatttgtgctactgctaaatct
gctcggattattgtactgaccacgtatgatagtgacgaagatatttatcggggattgcag
gcaggcgcaaaaggatacctgttgaaagaaactgaaccggacgagcttctgaatgcgatt
cgtaccgttcatcggggccagaagtatattccgcccgatgtgggagcaaagttggtacag
cgcctcagcaatccagaactgagtgaaagagaactagcagtactccgctcactggcgcag
ggaatgagtaatgccgagattgcggcggctttgagtatcggtgaaggcactgttaaatcc
catgtcaatcggattttgaataagttggatgtaagcgatcgcacccaagctgtgattgtt
gccgttaagcgcggcattgtaagtttgtag
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