Acinetobacter variabilis: RYU24_27680
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Entry
RYU24_27680 CDS
T07586
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
avb
Acinetobacter variabilis
Pathway
avb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RYU24_27680 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avb03400
]
RYU24_27680 (recD)
Enzymes [BR:
avb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RYU24_27680 (recD)
DNA repair and recombination proteins [BR:
avb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RYU24_27680 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
Helicase_RecD
SH3_13
AAA_22
SLFN-g3_helicase
PhoH
ResIII
nSTAND3
DEAD
Flavi_DEAD
T2SSE
PIF1
AAA_7
AAA_24
AAA
AAA_25
AAA_28
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BCT90363
LinkDB
All DBs
Position
complement(2913190..2914986)
Genome browser
AA seq
598 aa
AA seq
DB search
MDNFEDNCVENEQIHVSQQSAHLMAWIDYLCQPPFSSATFDAAAKLLIQQLLEAMQEGNS
CIPASAEQTALLHHLVLDRSQQAQGIAPFIFENQQLYLYRYWQLEQAVATQIARIKSQAI
TPVNLSERDHNLLTDPQQKQALEMVAKQGLNIITGGPGTGKTYTLAHMIAVLHEALPNIR
IAMAAPTGKAAQRMQEALQKALHSKKLQAFELETLKQVQPVTLHRLLGLGRLGRPRFHAK
QPLPYDVIVVDEASMLDLSLSQMLLAAVPDSARLILLGDADQLASVDVGTVLADLQQTSV
LADNWVNLITTRRFASGARIGAMAHFIQQEHVPASVLNQFEQQVVAASELQVIALDQVEI
DQLQLQYLPEINPTTGLQLDPYYDQLMYGYQAYADAIKQAQDQTDFEQYVQQAIQHFDHY
RILTAIRHGDLGLNKINQQIEQRFLASVGKLKQGDWYTGRPVMMTYNDYQLGLSNGDIGI
CFWREQEGQSQFEVYFPSLEKWVLATRLPKSIETAFALTIHKSQGSEFTHTAVVLDQQAK
NLLSKELIYTAITRAKKVVSLLVDRDAFTQALCVRTTRISGLSEKILEQCNNVLAKNK
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
gtggataactttgaggataactgtgtggaaaatgagcaaattcacgtgtctcagcaatca
gcccatttaatggcctggattgactatctatgtcagccaccattcagttcggcgactttt
gatgctgccgcaaaattgctgattcagcagctccttgaggcgatgcaggagggcaatagt
tgtattccggccagtgccgagcaaacagctctattgcatcatctggtgctggatcggagt
cagcaggctcagggtattgcaccctttatttttgaaaaccagcaattgtatttataccgc
tactggcagctggagcaggcggtcgccacccagatcgcccggatcaagtcacaagccatc
acgccagtaaatttaagtgagcgtgatcataacctcctgacagatccacagcaaaagcaa
gcgctggaaatggtcgctaagcagggactgaatattattactggtgggccaggaacaggt
aaaacctataccttggcacatatgattgcggtactgcatgaagccttacccaatatccgg
attgcgatggccgctccgacgggtaaagcggcgcagcggatgcaggaagccttgcagaaa
gctttacatagtaaaaaattacaagcttttgagctggagactttaaagcaggttcaacct
gttactttgcaccgcttactgggcttggggcggttgggacgcccccggtttcatgccaag
cagcctttgccttatgatgtgatcgtggtcgatgaagcatccatgctggacttaagcctg
tcacagatgctccttgctgcagtgccagattcagcccgcttaattctgttaggcgatgca
gaccaactggcctcggtggatgtcggcactgtactggcagacttgcagcagacttctgtt
ctggcagataactgggtcaatttaatcacgacgcgccgttttgcctcaggcgcccgaatt
ggtgcgatggcacactttatccagcaggagcatgttccagcatcagttttaaaccagttt
gaacagcaagtggttgctgcgagtgagctgcaagtaattgcactggaccaggtagagatt
gaccagctgcaactgcaatatctgccagaaataaacccaactacaggtctccaattagac
ccatattatgatcaactgatgtatggctatcaggcttatgcggacgcgatcaaacaggct
caggatcagactgatttcgagcaatatgtgcagcaggcaattcagcactttgatcattac
cggattctcaccgcaatccggcatggtgatctgggtttgaataaaatcaatcagcagatt
gaacagcgttttctggccagtgtaggcaagttaaaacagggcgactggtataccggccga
ccagtgatgatgacttataacgattatcagctgggtctgtccaatggtgatattggaatc
tgtttctggagagaacaagaaggacaatcacaatttgaagtatatttcccgagtctggaa
aaatgggtgctggcgacacgcctgccaaaaagtatagaaacagcttttgctttgacgatt
cataaatcgcaaggttcagaatttactcatacagctgtagtacttgatcaacaagccaaa
aatttactgagtaaggaactgatttatacagcgattactcgagctaaaaaagtcgtgagc
ttgctggtagatcgtgatgcgtttacacaagcgctatgtgtaagaaccacacgaataagt
ggtttaagcgaaaaaatacttgaacaatgtaacaatgtattggcaaaaaataaataa
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