Agrobacterium vitis VAR03-1: RvVAR031_12450
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Entry
RvVAR031_12450 CDS
T08810
Name
(GenBank) transcriptional regulator
Organism
avf
Agrobacterium vitis VAR03-1
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ROK
HTH_Crp_2
MarR
HTH_24
HTH_IclR
MarR_2
DprA_WH
DUF5821
TrmB
Motif
Other DBs
NCBI-ProteinID:
BCH53635
UniProt:
A0A6S6MMD5
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All DBs
Position
1:1383494..1384699
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AA seq
401 aa
AA seq
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MLMKSSTEQIRRQNSALVLAALRVEQAMSHTQIAAVTGLASATVTAITSELEQTGVIERH
EQQIAGARGRPRVLLSRRRDFAYVMSVRISSDRLNYTLSDYRGTLMDRFEEPRPLDVSAA
GFIDGLGRNLSRLASRSKLSPEKVAVLSVSSKGIVDAGGARLLWTPVFGQQPLDLKAGLG
DFDGAMALLSNETLLVAHGLSRRMDAQDGTFRGLIALSLGHSIGLGIARPVPDGTVAVSA
PNFGHMLNTADSKLCRCGARGCIEASAGFYGILRMAFEVRPDTIPAKFVPITEMDKIALS
ARQGNRMAQYAFRQAGLALGQGLSRVFSLHETLPVIITGPGTRYYDLLAQGMEEGLVQSL
QVRLDGAPPISLVGDEADLVQEGHVDHALRAIDERLFGGGG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgaaatccagcaccgaacagatccgccgccagaattcagccctggttctcgcc
gctttgcgggtggagcaggccatgtcccatacccagatcgccgccgtgaccggtcttgcc
tcggcaacggtgaccgccattaccagtgagctggaacagaccggcgtgatcgagcggcat
gaacagcagatcgctggcgcacggggcaggccacgggtactgctatcgcgccgccgggat
ttcgcctatgtgatgtcggtcaggatttcctccgaccggctgaattacaccctgtcggat
tatcgcggcacgctgatggaccgttttgaggagccacgcccgcttgatgtgtctgcggcg
ggttttatcgacggacttggccgcaacctttcccgtctggccagccgctcgaaactgtcg
ccggaaaaggtcgccgttctctccgtcagttccaagggtatcgtcgatgcaggcggcgca
agactgctctggacgccggtgttcggtcagcaaccgctcgacctcaaggcgggccttggt
gattttgatggggcgatggctctgctcagcaacgagacattgctggtggcccacggcctc
agccgccgcatggatgctcaggacggcacgtttcgcggtctgattgccctctcgctcggc
cacagcatcggcctaggtattgcaaggccggtgccggatggcacggtggccgtcagcgcc
cccaatttcggccatatgctgaataccgctgacagtaaattgtgccgttgcggcgcgcgg
ggctgtatcgaggcctccgctggcttctacggcatcctgcgcatggcgttcgaagtgcgg
cccgataccattcccgccaagttcgtgcccatcaccgaaatggacaagatcgcgctctcg
gcccgccagggcaatcgcatggcccaatatgccttccgccaggcggggctggcgttgggg
cagggcctgtcacgggtgttcagcctgcacgaaacgctccccgtcatcatcaccggcccc
ggcacccgctattatgacctgctggcgcagggcatggaggaggggcttgtccaatccctg
caagtccgcctcgatggcgccccgccgatcagccttgttggagacgaggccgatctggtg
caggaggggcatgtggatcacgcgctgagggcgatcgatgagcggttgtttgggggtggg
ggatga
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