Agrobacterium vitis VAR03-1: RvVAR031_15330
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Entry
RvVAR031_15330 CDS
T08810
Symbol
hemB
Name
(GenBank) delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00860
Porphyrin metabolism
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
avf01120
Microbial metabolism in diverse environments
avf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RvVAR031_15330 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avf04147
]
RvVAR031_15330 (hemB)
Enzymes [BR:
avf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
RvVAR031_15330 (hemB)
Exosome [BR:
avf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RvVAR031_15330 (hemB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
BCH53923
UniProt:
A0A1S2DX71
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All DBs
Position
1:complement(1688196..1689209)
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AA seq
337 aa
AA seq
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MTNKTHLVDDITGHRRMRRNRKADWTRRMVQESRLTVDDLIWPIFLVPGSGIVEPIAAMP
GVNRMSVDKAVEAVKEAADLGIPAIATFPNIEMNLRDQTGSHILEANNLLNQATAAIKKA
VANIGVITDVALDPFTSHGHDGILRGDDIVNDETVDQVVKAAILQADAGSDIIAPSEMMD
GRIGAIRRGLDAAGHQSVGIMSYATKFSSGYYGPYREAISTAGLLKGDKNSYYISPANGT
EAVRDAAMDVEEGADMLMVKPGLPYLDICWRLKEAFSLPVFAYQVSGEYAQIKAAGLNGW
IDEERVMMETLLCFKRAGCDGILSYFAVEAAKRLARS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaagacccacctcgtcgacgatattaccggccaccgacgcatgcgccgcaac
cgcaaggcggattggacgcgccggatggtccaggaaagccggttgacggtggacgatctg
atctggccgatcttcctcgtgcccggcagcggcatcgtcgagccgatcgccgctatgcct
ggggtcaacaggatgagtgtcgacaaggccgtcgaggcggtgaaggaagccgccgatctc
ggcattccggccattgccacctttccgaatatcgagatgaacctgcgggaccagacgggt
tcccatatcctggaagccaataacctgctcaaccaggcgacggcggccatcaagaaggcc
gtcgccaacatcggcgtgattaccgatgtggcgctggacccgtttaccagccatgggcat
gacggcattttgcgcggcgatgatatcgtcaatgacgaaacggtcgatcaggtggttaag
gcagcgatcctgcaggccgatgccggctccgacattatcgcgccgtccgaaatgatggat
gggcgaatcggcgccatccgccgcgggctcgacgccgccggtcaccagtcggtcggcatc
atgtcctatgcgacgaaattctcctccggctattacggcccctatcgtgaggcgatttcc
accgccggtctgctgaagggcgacaagaacagctattacataagcccggctaacggcacc
gaagcagtgcgcgatgctgccatggatgttgaggaaggagcggatatgctgatggtcaag
cccggcctgccctatctggatatctgctggcgtctcaaggaagccttcagcctgccggtc
ttcgcctatcaggtgtccggcgaatatgcacagatcaaagcggcgggtctgaatggctgg
atcgacgaggagcgggtgatgatggaaacgctgctctgcttcaaacgagccggatgcgat
ggcattctgagttattttgccgtggaagcggcaaagcggcttgccagaagctga
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