Agrobacterium vitis VAR03-1: RvVAR031_16320
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Entry
RvVAR031_16320 CDS
T08810
Symbol
birA
Name
(GenBank) biotin--[acetyl-CoA-carboxylase] ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00780
Biotin metabolism
avf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
RvVAR031_16320 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avf03000
]
RvVAR031_16320 (birA)
Enzymes [BR:
avf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
RvVAR031_16320 (birA)
Transcription factors [BR:
avf03000
]
Prokaryotic type
Helix-turn-helix
Other families
RvVAR031_16320 (birA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
BPL_LplA_LipB_2
Motif
Other DBs
NCBI-ProteinID:
BCH54022
UniProt:
A0A6S6MPS7
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All DBs
Position
1:1791524..1792312
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AA seq
262 aa
AA seq
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MSDYSTHRRKALDAFRHIALDEVDSTNQQCLIRARDGDPGDLWITANRQTGGRGRRGRPW
ASEPGNLYSSLLLIDPAPLADLASLPLAVAVAVHDAIGVVLPSGAPPLEIKWPNDVLIGR
AKTSGILLEAERTPDGRNALVIGIGINLLFKPTETPYPTASLVEHGAAVTPDELFTHLFA
AMADALALWDRGRGVKAVMQRWRHVACGIGEKITVNLPDRSISGVFSGIDDKGILLLDRG
SLGITPVAAGDVFFEPNGPRKE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgactattccacccatcgtcggaaggcgctcgacgccttccgacatattgcgctg
gacgaggtggattccaccaaccagcaatgcctgatcagggcccgtgacggtgatcccggt
gatctctggatcacggccaaccgccagacaggcggtcgggggcgtcgtggcaggccttgg
gcctcggagcccggcaatctctatagctctcttttattgatcgatccagcgcctttggcc
gatctggcttcgctgccgctggctgtggccgtggccgtgcatgatgcgattggcgtcgtg
ttgccgtcgggtgcgccgcctttggaaatcaaatggccgaatgatgtgctgatcggtcgt
gccaagacctccggcattctgctggaagcggaacggaccccggatggtcgcaatgccctg
gtcatcggtatcggcattaatcttcttttcaaacccactgaaacgccgtatcccacggct
tcgctcgttgagcatggcgcagccgtgacacctgatgagcttttcacacatcttttcgct
gccatggcggatgccttggcgctctgggatcggggccgtggcgtcaaggccgtaatgcag
cgctggcggcatgtcgcgtgtgggatcggcgagaaaatcaccgtcaatcttccggatcgg
tcgatttccggtgtgttttcaggaatcgatgataaagggatattattgctcgaccggggt
tcgctaggcatcacgccagttgcggcgggagatgtgtttttcgagccgaatgggccaagg
aaagaatga
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