Agrobacterium vitis VAR03-1: RvVAR031_30490
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Entry
RvVAR031_30490 CDS
T08810
Symbol
glgB
Name
(GenBank) 1,4-alpha-glucan branching enzyme GlgB
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00500
Starch and sucrose metabolism
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
Module
avf_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
avf_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RvVAR031_30490 (glgB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avf04147
]
RvVAR031_30490 (glgB)
Enzymes [BR:
avf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
RvVAR031_30490 (glgB)
Exosome [BR:
avf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RvVAR031_30490 (glgB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase_C
Alpha-amylase
DUF5696
Motif
Other DBs
NCBI-ProteinID:
BCH55439
UniProt:
A0A6S6MVF1
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All DBs
Position
1:3323775..3326024
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AA seq
749 aa
AA seq
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MKKTTRQTQASAESGHPPLADNLPSAEIEAIVSGLHTDPFSVLGVHAGANGFIARCFVPG
ADSITALTLDGSLAGELACLDPAGFFAGPVAIKTQQPLRYRACRGDVEWSMTDPYSFGPV
LGPMDDYFLREGSHLRLFDKMGAHPIKHQGVDGFHFAVWAPNARRVSVVGDFNEWDGRRH
VMRLRRDTGIWEIFAPDVRPGSAYKYEIIGVNGELLPLKADPFARRSEFRPQTASVTAAE
LSQNWEDAAHLAHWGSIDKRRQPISVYEVHAGSWQKRPDGTFLSWDELAERLIPYCTEMG
FTHIEFLPITEHPYDPSWGYQTTGLYAPSARFGEPEGFARFVNGCHKVGLSVILDWVPAH
FPTDAHGLRFFDGTALYEHEDPRKGFHPDWNTAIYNYGRIEVLSYLVNNALYWAEKFHLD
GVRVDAVASMLYLDYSRKEGEWIPNEYGGRENLEAVRFLQKMNEHIYGAHPQVMTIAEES
TSWPKVSQPVHEGGLGFGFKWNMGFMHDTLSYFARDPVHRKHHHHEITFGLIYAYSENFM
LPISHDEVVHGKGSMIAKMPGDDWQKFANLRAYYGFMWGYPGKKLLFMGQEFAQWSEWSE
ERSLDWNLLQYPLHEGMRRLVRDLNFTYRNKPALHARDCEGEGFEWLISEDADQSVFAWL
RKTPGERPVAVIANLTPVYYERYDVPLPVAGRWREILNTDAEIYGGSGKGNGGRVEAVLD
RATTSDKAPWAHATLSLPPLAVIMLELEQ
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaacaaccaggcagacgcaggcatcagctgagagcggccatccgcccttagct
gacaatctgccttctgccgagatcgaagccatcgtttcgggcctgcacaccgatccgttt
tcggtgcttggcgttcatgccggtgcgaatggttttattgcccgctgtttcgtgccgggt
gccgacagcattaccgcgctcacactcgacggcagccttgccggagagctggcctgtctt
gaccccgccggttttttcgccggtccggtggcgatcaagacccagcagccactgcgctac
cgcgcctgccggggcgatgtggaatggtcgatgaccgatccctatagtttcggccctgtt
ctcgggccgatggacgattacttcctgcgcgaaggctcgcatctgcggctgttcgacaag
atgggcgcccatccaatcaagcatcagggcgttgatggctttcatttcgccgtctgggcg
ccgaatgcaagacgggtctcggtggtcggcgatttcaatgaatgggacggtcgccgccat
gtgatgcggttgcggcgcgataccggcatctgggaaattttcgcccccgatgtccggccc
ggttcggcctataaatacgagatcatcggcgtcaatggcgagcttttgccgctgaaggca
gatcctttcgcccgccgcagcgagtttcgtccgcaaaccgcgtccgtcaccgccgccgag
ctttcccagaactgggaggacgcggcgcatctggcccattggggcagcattgacaaacgc
cgccagccgatctcggtctatgaagtccatgccggttcctggcagaagcggcctgacggc
acattcctcagctgggacgagctggcggaacggctgatcccctattgcaccgaaatgggc
tttacccatatcgaattcctgcccatcaccgaacatccctatgacccatcctggggctat
cagacgacggggctttatgcgccgagcgcgcggttcggcgaaccggaaggctttgcccgc
ttcgtcaacggctgtcacaaggtcggcctcagcgtcatacttgattgggttccggcccat
ttcccgaccgatgcccatgggttgcggttttttgacggcaccgctctttatgagcacgag
gacccgcgcaagggtttccaccccgattggaacaccgcgatctacaattacggacggatc
gaggttctgtcctatctggtcaacaatgcgctttattgggctgaaaagttccacctggac
ggcgtgcgggtcgatgcggtcgcctcaatgctctatctcgattattcccgcaaggaaggc
gagtggatacccaacgaatatggcgggcgggaaaacctggaggccgtgcgtttcctccag
aagatgaacgagcatatctacggcgcccatccgcaagtgatgaccattgccgaggaaagc
acctcctggccgaaagtgtcccagccggtccacgagggcggcctcggcttcggcttcaag
tggaacatgggcttcatgcacgacactttgagctattttgcccgcgaccccgtgcatcgc
aagcaccaccaccatgaaatcaccttcgggctgatctatgcctatagtgaaaatttcatg
ctgccgatttcccacgatgaagtggtgcatggcaaaggttcgatgattgccaaaatgccc
ggcgacgactggcaaaaattcgccaatcttcgcgcctattacggtttcatgtggggttat
cccggcaagaaactgctgttcatgggccaggaatttgcccagtggagcgaatggagcgag
gagcggtccctggactggaatctgctgcaatatccgctgcatgagggcatgcgccgcctg
gtgcgtgatctgaactttacctatcgcaacaagccggcgctgcatgcccgcgattgcgag
ggcgaagggttcgaatggctgatcagcgaggatgccgatcaatcggtctttgcctggctg
cgcaagacgcctggtgaaaggccagtggctgtcatcgccaatctgacgccggtctattac
gagcgttatgacgtgccgctgccggtggccgggcggtggcgggaaatcctcaataccgat
gccgagatctatggcggtagcggcaagggcaatggcgggcgggtggaggccgtgctggat
agggcaacgacctccgacaaggcgccgtgggcgcatgcgacgctgtcactgccgccgctg
gcagtgatcatgctggagttggaacagtag
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