Agrobacterium vitis VAR03-1: RvVAR031_38210
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Entry
RvVAR031_38210 CDS
T08810
Name
(GenBank) transcriptional regulator
Organism
avf
Agrobacterium vitis VAR03-1
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_29
HTH_28
HTH_Tnp_ISL3
Sigma70_r4_2
HTH_IclR
HTH_23
MarR_2
HTH_8
HTH_31
HTH_Crp_2
HTH_37
Motif
Other DBs
NCBI-ProteinID:
BCH56211
UniProt:
A0A6I4FYP7
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All DBs
Position
2:581654..582619
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AA seq
321 aa
AA seq
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MDNRAGEMQVFTRVVEAGSFSEAARLLQMTPSTVSKLLNRIEQRLGVRLLERSTRRLSLT
DEGQIYYERSLVLLAELDDIEQELSKGAASAGGTVRVNASVAFGVLGLEPLLPAFWQAHP
NIIVDLSLSDDIIDLYMERTDVAFRVGSLQNSTMMARRIGVARRKIVAAPAYLERHGMPQ
SIEDLGRHNCLGFNFRRIAPVWPLRESGRIVDRAVHGSLVANNGETVRRMAIAGVGLARL
GDYHVRADLAAGRLVEVLASAVDGDEEEINALYLGGRRLAHRVRVFLDFMAPRLQGFLQQ
RSFSAEGVTSTPRVMLECPVR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggataaccgggcaggcgagatgcaggttttcacgagggtggtggaggcgggtagtttc
tccgaggcggcacgcctgctgcagatgacgccgtcaacggtcagcaaactcctcaatcgg
atcgaacagcgattgggcgtccgattgctggagcggtcgacacgccgactatcgctgacc
gacgaggggcagatctattacgaacggagtctggtcttgctggccgaactcgacgatatc
gagcaggaactgtctaagggtgcggccagtgcgggcggaacggtgcgggtcaatgcctcg
gttgcgtttggcgtgcttggtctcgaacctttattgccagccttctggcaagcccatccc
aacatcattgtcgatctgtcgctgtccgacgacattatcgatctctatatggagcggacc
gacgtcgccttccgggtgggcagcttgcagaattcgacgatgatggcgcgtcgcatcggc
gtcgcccgccgcaagatcgtcgccgccccagcctatcttgagcgccacggcatgccccaa
tccattgaggatctcgggcggcataattgtctcgggttcaacttccgcaggatagcaccg
gtgtggcctctaagagagagtggccggatcgtcgatcgcgccgtccatggatcgctggtc
gccaacaacggagagacggtgcggcgcatggcaattgcaggtgtcgggctcgcccgcctc
ggcgattatcacgtccgcgccgatctggccgccgggcgtctggtcgaggttcttgcctcg
gcggtggacggtgacgaggaggagatcaacgccctctatctcggaggacgccgcctggcg
catcgcgtccgtgtctttctcgatttcatggcaccgcgccttcaaggttttctgcaacag
cgatcgttttctgctgagggcgttacgagtacgccgcgtgtcatgctagaatgtcccgta
cggtga
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