Allorhizobium ampelinum: Avi_6007
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Entry
Avi_6007 CDS
T00851
Name
(GenBank) ATP-dependent DNA ligase
Organism
avi
Allorhizobium ampelinum
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GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Se-cys_synth_N
Motif
Other DBs
NCBI-ProteinID:
ACM39024
UniProt:
B9K2C6
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Position
2:complement(1007636..1009255)
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AA seq
539 aa
AA seq
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MMRAFATLLDRLVLTPSRNGKLKLLADYFASVPDPDRGYALGVLAGTLDLKTVKPALLKE
LVLERMDPVLFGYSYDYVGDLAETISLVWDQDRGEKAEIAEPSLGEVVALMQSLGRTQVR
GAVRDLLDQLDTSGRFAFLKLATGGLRIGVSARLAKQALSEMSGKDVGEIETLWHGLEPP
YESLFAWLEGGADKPVLATPAIFHSVMLSTPVGNGDLDGLDPADFAAEWKWDGIRVQLSR
HGDTCRLYSRSGDDISGAFPDIVAAANFDGVIDGELLVGGTARSNQPTRSFSDLQQRLNR
KSVTTKMLSDYPAFIRAYDLLFTGDQDVRNLGYEVRRGLLAEIVEKAPATRFDLSPLISF
SNWDELDALRHAPPDPVIEGVMIKRRDSIYQAGRAKGPWFKWKKQPLNVDAVLMYAQRGH
GKRSSYYSDFTFGVWMQMPEGGSQLVPVGKAYFGFTDQELEILDKYVRNNTIDRFGPVRS
IRAEPDHGFVVEVAFEGLNRSTRHKSGVAMRFPRISRLRSDKLPRDADRLETLLHMLPA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
ttgatgcgcgcctttgctacgcttctcgaccgcctcgtcctgaccccgagccgcaatggc
aagctcaagctgttggccgattacttcgccagcgtcccggacccggaccggggctatgcg
ctgggcgttctggccggaacgctcgatctgaagacggtcaaaccagccctcctgaaagaa
ctcgtgctggagcggatggacccagttctcttcggttattcctatgattatgtcggcgat
ctcgccgaaaccatttcgctggtctgggatcaggaccgcggtgaaaaggccgaaatagcc
gaaccaagccttggcgaggtcgtcgccctcatgcaatcacttggccgcacccaggtgcgg
ggagccgtgcgcgacctgctcgaccagctcgacacgtccggccgctttgcctttctcaaa
ctggcgaccggcggcttgcgaatcggggtgtcggcaaggcttgccaaacaggcgctttcc
gagatgtcaggcaaggatgtcggtgagatcgagacgctgtggcacgggctggagccaccc
tatgagagcctgtttgcctggcttgagggcggcgcagacaagcctgtgctggcgacaccg
gcaatctttcattcggtcatgctgtccactccggtcggcaatggtgatctggatggtctc
gatcccgccgatttcgccgccgagtggaaatgggacggtatccgggtgcagctttcgcgc
catggagacacctgccgcctctattcccgctccggcgacgacatttccggggcttttccc
gatattgtcgcggcagcgaatttcgatggggtgatcgatggcgaattgctggtcggcggc
accgcccgctccaaccagccgacccgcagcttttccgatcttcagcaacggctgaaccgc
aaaagcgtcacgacgaaaatgctcagcgattatccggccttcatccgcgcctatgatctg
ctgtttaccggcgaccaggatgtgcgaaacctcggctatgaggtacgccgggggttactt
gcagagattgtcgaaaaagcccccgccacccgattcgatctctcgccgctgatctcgttt
tccaactgggatgagttggacgcgctgcggcacgccccgcccgatccggtcatcgaaggg
gtaatgatcaagcgccgcgacagcatctaccaggcggggcgcgccaaagggccgtggttc
aagtggaaaaagcagccgctgaatgtggatgcggtgctgatgtatgcccagcgcggccat
ggcaagcgctccagctattattccgattttaccttcggggtctggatgcagatgccggaa
ggcggcagccaactggtgccggtgggcaaggcctatttcggctttaccgatcaggagctg
gaaattctcgataaatatgtgcgcaacaataccatcgaccggttcggacccgtgcgctca
atccgcgccgagccggatcatgggtttgtggtggaggtggcgtttgaagggctgaaccgg
tccacccggcacaaatccggcgtcgccatgcgctttccccggatttcgcggctgcggagc
gacaaacttccgcgtgatgctgaccgcctggaaacgctgctgcatatgctgccagcatga
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