Apaloderma vittatum (bar-tailed trogon): 104267744
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Entry
104267744 CDS
T08559
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04142
Lysosome
avit04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104267744
04142 Lysosome
104267744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
avit04131
]
104267744
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avit04147
]
104267744
Membrane trafficking [BR:
avit04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104267744
Exosome [BR:
avit04147
]
Exosomal proteins
Proteins found in most exosomes
104267744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
Motif
Other DBs
NCBI-GeneID:
104267744
NCBI-ProteinID:
XP_009876806
LinkDB
All DBs
Position
Unknown
AA seq
1642 aa
AA seq
DB search
MESDKFICIREKVGEQAQVVIIDMSDPTTPIRRPISAESAIMNPASKVIALKDAGKTLQI
FNIEMKSKMKAHTMAEEVIFWKWISVNTVALVTETAVYHWSMEGESQPQKMFDRHASLAG
CQIINYRTDEHQKWLLLIGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAAFAEFKIEGNA
KPSTLFCFAVRSPAGGKLHIIEVGQPATGNQPFVKKAVDVFFPPEAQTDFPVAMQIGIKH
GVIYLITKYGYIHMYDLESGVCIYMNRISADTIFVTAPHEPTSGIIGVNKKGQVLSVCVE
EDNIVNYATNVLQNPDLGLRMAIRSNLAGAEELFARKFNTLFAQGSYADAAKVAASAPKG
ILRTSDTIRKFQSVPAQPGQASPLLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEK
WLKEDKLECSEELGDLVKTADPTLALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVGY
TPDWIFLLRSVMRVSPDQGLQFSQMLVQDEEPLANINQIVDVFMENSLIQQCTSFLLDAL
KNNRPAEGHLQTRLLEMNLIHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHY
TDLYDIKRAVVHTHLLNPEWLVNFFGSLSVEDSVECLRAMLSANIRQNLQLCVQVASKYH
EQLGTQSLVELFESFKSYEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRE
SNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPS
RIPAVVGGLLDVDCSEDVIKNLIMVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGC
EEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLEL
IKVCNENSLFKSEARYLVRRKDPELWANVLEENNPFRRQLIDQVVQTALSETQDPEEVSV
TVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNY
DAPDIANIAISNELYEEAFAIFRKFDVNTSAIQVLIEHIGNLDRAYEFAERCNEPAVWSQ
LARAQLQKDLVKEAIDSYIKADDPSAYMEVVQAANRNDNWEDLVKFLQMARKKARESYVE
TELIFALAKTNRLSELEEFISGPNNAHIQQVGDRCYEEGMYEAAKLLYNNVSNFARLAST
LVHLGEYQAAVDSGRKANSTRTWKEVCFACVDGQEFRLAQICGLHIVIHADELEELISYY
QDRGYFEELIALLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLR
AAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIIAKVANVELYYKALQF
YLDYKPLLINDLLLVLSPRLDHTRTVNFFSKVNQLLLVKPYLRSVQNHNNKGVNEALNNL
LTEEEDYQGLRASIDAYDNFDNITLAQRLEKHELIEFRRIAAYLYKGNNRWKQSVELCKK
DRLYKDAMQYAAESKDAELAEKLLQWFLEEGKQECFAACLFTCYDLLHPDVVLELAWRHN
IMDFAMPYFIQVMREYLTKVDKLDASESLRKEEEQVAEPTPIVFGQQLMLTAGPSAVPPQ
ANFPYGYTAPGFTQPPVYGFNM
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgacaagttcatatgcatcagggagaaagtgggagagcaggcacaagtagtg
ataattgacatgagcgatccaacaacaccaatcagacgtccgatttctgccgaaagtgcc
atcatgaatccagcatctaaagtaatagcactgaaagatgctgggaaaacacttcagatc
tttaacattgagatgaaaagtaaaatgaaagcccacacaatggcggaggaagtgatcttc
tggaaatggatatctgtgaatacggttgccttggtgacagagacagcagtctaccactgg
agcatggagggagaatcgcaaccccaaaagatgtttgacaggcacgctagtcttgcgggc
tgccaaatcatcaattacagaacagatgaacaccaaaaatggctgctgctgataggaatt
tcagcacagcaaaatcgtgtggttggtgcaatgcagctgtactcagttgacagaaaagtc
tcccaacctatagagggccatgcagcagcttttgcagaattcaaaatagagggaaatgcc
aaaccttctactctcttctgttttgccgtgaggagtcctgcaggaggaaagctacacata
atcgaagtaggtcagccagcaactggaaatcagccatttgttaagaaagctgttgatgtg
tttttcccacctgaggcacagacagactttcctgtggcaatgcagattggaattaagcat
ggcgttatctacctgatcaccaagtacggatatattcacatgtatgacctggagtctgga
gtgtgcatctacatgaaccgtattagtgctgatactatctttgtcacagctcctcatgaa
cctacctcaggcattattggtgtgaacaaaaaaggacaggtgctttctgtatgtgttgag
gaagacaacatagtgaactatgctacgaatgttctccagaatcctgacttgggactgcgt
atggctatacgtagtaatctagctggggcagaggagttatttgccagaaagttcaacaca
ctgtttgctcaaggaagctacgcagatgctgctaaagtagctgcatctgcaccaaaggga
attctacgtaccagtgatacaatcaggaagttccagagtgtaccagctcagcctgggcag
gcctctcccctactccagtacttcggaatattgcttgaccagggacagctgaacaagttt
gagtctctggagctctgccgccctgtcctacagcagggtcgcaagcagcttctagagaag
tggttgaaggaagacaagctggagtgctcagaggagctgggagacttggtgaagaccgct
gacccaacccttgcactcagcgtctaccttcgtgctaatgtgccaaacaaagtgattcag
tgctttgctgaaactggtcaattccagaaaatagtgctgtatgctaaaaaggttggctat
accccagactggatcttcctactgagaagtgtgatgagagtcagtccagaccaaggcctg
cagttctctcagatgctggtacaagatgaggagccactggctaacattaaccagattgtg
gatgtgttcatggagaacagtcttattcagcagtgcacatcctttctgttggatgccctg
aaaaataaccgcccggcagaaggccaccttcagactcgtctcctggaaatgaatttgatt
catgccccgcaggttgcagatgccattcttggaaaccaaatgtttacacattatgatcgt
gctcatattgcccagttatgtgaaaaggcaggcttgctccagcgagctttggaacactac
acagatctctatgatattaaacgtgctgttgttcatactcatctcttgaatcctgagtgg
cttgtgaacttctttggctctctctcagttgaagactctgtggagtgtttgcgtgccatg
ctgtcagccaatattaggcaaaacctacagctctgtgtgcaagttgcttctaaataccat
gagcagcttggtacccagtctcttgtggaactctttgaatcttttaaaagctatgaagga
ctgttctatttcctgggttccattgtaaacttcagccaggatccagatgttcatttcaag
tacattcaggcagcttgcaagactggtcagataaaggaagtagaaagaatttgccgtgaa
agtaactgctataacccagaacgggtgaagaactttctgaaggaggcaaagcttacagac
cagcttcctctgatcattgtctgcgatcgatttgactttgttcatgacctggtgctctac
ttatatcgcaataacctgcagaagtatatagagatctatgtacagaaggtgaatcctagc
cgtatacctgcagtggttggtggacttcttgatgtggattgttctgaagatgtcattaag
aacttgatcatggtagttagaggccagttctcaacagatgagctagtggctgaagtggaa
aaaagaaaccggcttaagttgctgttgccatggcttgaatcaaggattcatgaaggctgt
gaagaacctgcgactcataatgccttggccaaaatctacattgacagtaataataatcca
gaacggttccttcgtgagaatccttactatgacagccgtgtagttggcaaatattgtgaa
aagagggaccctcatctggcctgcgttgcttatgagagggggcaatgtgatctggagctc
ataaaggtctgcaatgagaactcactgtttaagagtgaggctcgctatctggtgcgcagg
aaggaccctgagctctgggcaaatgttctggaagaaaataacccattcaggaggcagctt
attgaccaggttgtccagacagctttgtcagagacacaggatccagaggaggtgtctgta
actgtgaaagctttcatgaccgctgacctgcctaatgaattgattgagttactggaaaaa
attgtcttggataattctgtattcagtgaacacaggaatctccagaatctgctgatcctg
actgccattaaggctgaccgcactcgtgtaatggaatacatcaaccggctggataactac
gatgccccagatattgcaaacattgccatcagtaatgagctatatgaagaagcctttgct
atattcagaaagtttgatgttaatacttcagcaattcaggtgctgattgagcacattggc
aacttagaccgtgcttatgaatttgcggagagatgtaatgaaccagcagtatggagccag
ctagccagagcacagctccagaaggatctggtgaaagaagccattgactcctatataaag
gcagatgatccgtctgcctacatggaagttgttcaagcagctaatagaaacgataactgg
gaggacctagtcaagttcttacagatggccaggaagaaggctagagagtcttatgtagag
acggagcttatttttgctttggcaaaaactaatcgtctgtcagaactggaggagtttatt
agtggccctaataatgcccatatccaacaggttggtgatcgctgctatgaagaagggatg
tacgaagcagcaaaactactctataacaacgtatctaactttgctcgcctggcatctacc
ttggttcaccttggagagtatcaggcggcagtggacagtggccgcaaagccaacagtacg
aggacttggaaagaggtatgcttcgcctgtgtggatggacaggaatttcgcttggcgcag
atctgtggcttacacattgtcattcatgctgacgaacttgaagagctgatcagttactat
caggatcgtggctactttgaagaactgattgcgcttttggaagctgcattaggccttgag
cgtgcacacatgggaatgtttactgaacttgctatcttgtactccaaattcaagcctcag
aaaatgagggaacacctggagctcttctggtctagagttaacattccaaaggtgctcaga
gctgcagaacaggctcatctctgggcagaacttgtattcctctatgacaagtatgaggag
tatgacaatgcaataattactatgatgaatcatcccactgatgcctggaaagaagggcag
tttaaagatataattgccaaggtggctaacgtggagctgtactacaaagccttgcagttc
tacttagactacaaacctctgctgatcaatgatctcctgcttgtattatctccacgacta
gatcacactaggacagtcaattttttctcaaaggttaatcagctacttctagtaaagcct
tatctgcgttcagttcagaaccacaacaacaaaggagttaacgaagctctaaacaacctt
ttaacagaggaggaagattaccagggtttgagagcttccattgatgcctatgacaacttt
gataacataacattggctcagcgtctggaaaagcatgaactaattgaatttagacgtatt
gcagcatacttgtataagggtaacaaccgctggaagcagagtgtggagctgtgcaagaaa
gaccgtctgtataaggatgcgatgcagtacgctgcagagtccaaggatgcagagctagct
gagaagctgcttcagtggttcctggaagaaggcaagcaggagtgcttcgcagcctgcctt
ttcacgtgttacgacttgctgcacccagatgtagtccttgagttggcgtggaggcataac
atcatggactttgcaatgccttatttcatccaagtgatgagagagtaccttaccaaagtg
gataaacttgatgcttctgaaagcctaagaaaagaagaggaacaagtagctgaacccact
ccaatagtatttggccagcagttgatgttaacagcaggccccagtgcagtacctccccag
gcaaacttcccatatggatatacagcaccgggattcacccagccgcctgtctatggtttc
aatatgtaa
DBGET
integrated database retrieval system
