Apaloderma vittatum (bar-tailed trogon): 104267779
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Entry
104267779 CDS
T08559
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104267779
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
avit01001
]
104267779
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avit03021
]
104267779
03036 Chromosome and associated proteins [BR:
avit03036
]
104267779
Enzymes [BR:
avit01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
104267779
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104267779
Protein kinases [BR:
avit01001
]
Serine/threonine kinases: Other
TAF1 family
104267779
Transcription machinery [BR:
avit03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104267779
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
104267779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
zf-CCHC_6
Cac1_C
Ribosomal_L44
zinc_ribbon_12
Motif
Other DBs
NCBI-GeneID:
104267779
NCBI-ProteinID:
XP_009864857
LinkDB
All DBs
Position
Unknown
AA seq
1781 aa
AA seq
DB search
MGTLQPVRRPDDDEDDYDADCEDIDSKLMPPPPPPPVPGKREDERDAAVTVSEDGDGIIL
PSIIAPSSAASDKVDFSSSSDSESEMGPQEARQAESKEGKLTLPLAGIMQRDATKQLPSV
TELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRELAQEVQMQEGEVVAEAGM
EGKSPWEYEFAAPPPPEQCLSDDEITMMAPVESKFSQSTGDIDKVTDTKPKVAEWRYGPA
QLWYDMLGIPEDGSGFDYGFKLKEKKKEQEIKGHTDEANAVLMDEKGDLLADEHFLMVTQ
LQWEDDVIWNGDDVKHKGTKTQRASLAGWLPSSMTRNATAYNAQQGLNRSGSLLNPPIPL
SQKPNVAGALCITKGKEKQASEQQVSLDEDKPWYSIFPIDNEELVYGRWEDNIIWDDQAM
ETYLDPPVLTLDPNDENIILEIPDEKEEMTLNSPSKENKKESSLKKSRILLGKTGVIKEE
PQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPMK
LRQFHRPPLKKYSFGALSQPGPHSVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDL
TGKDGDLILAEYSEENAPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFL
GSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYVRELVDIFVVGQECPLYEV
PGPNSKRANTHIRDFLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSESSIRKRLKLCAD
FKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAP
EEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNK
PTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRT
MSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEILSTDTDSSS
AEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLGEDGGNDKERGKKDRRD
KKGLSSTSGASANSHKDDDTASVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKPAV
IDAYCRIRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKK
PKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHN
DNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRP
HKSIHRRRTDPMVTLSSILEGIINDIRDLPNTYPFHTPVNPKVVKDYYKIITRPMDLQTL
RENVRKRQYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLAR
LEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIANPMDL
ETIRKNISKHKYQNRETFLDDVNLILANSIKYNGPDSQYTKTAQEIVNICYQTLAEYDEH
LTQLEKDISTAKEAALEEADLESLDPMTPGPYTPQPPDLYDTNTSLSMSHDASVYQDESN
LSAMDTPITTPEKQGTQMRQGRGRLGEEDSDVDIEGFDEDDDGKPKTPAPEVEDADGDLA
DEEEGSAQQPQASVLYEDLLMSDGEDDDDDDGSDEEGDNPFSSIQLSESGSDSDVEPTAV
RPKQPHVLQENTRMGMDNEESMMSYEGDVGETSHVMEDSNI
NT seq
5345 nt
NT seq
+upstream
nt +downstream
nt
atgggcactctgcagccagttcgaagaccagatgatgacgaggacgattatgatgctgac
tgtgaagacattgattccaagttgatgccgccaccaccaccacctccagtacctggaaag
agagaagatgaaagggatgcagctgttacggtatctgaagatggagacggtatcattttg
ccctccatcattgctccttcctctgctgcctccgacaaggtggatttcagcagcagctct
gattctgagtcagagatgggacctcaagaagccaggcaggcagaatccaaggaaggcaaa
ctcacacttcctcttgcaggaatcatgcagcgagatgctaccaaacagttgccaagtgtt
acagagctcttcccggaatttcgaccaggcaaggtgctgcgtttcctgcgtctctttggc
cctggaaagaatgttccatcggtttggcgtagtgcccggaggaaacggaagaagaaacat
cgagagctggcacaagaagtacagatgcaggagggtgaagttgtagctgaggctggaatg
gaaggaaaatctccttgggaatatgagtttgctgctccaccccctcctgagcagtgcctt
tcagatgatgagattaccatgatggcacctgtggaatcaaaattttcccagtcaactggt
gatatagataaagtgacagatacaaagcctaaagtggcagaatggcgctatggccccgca
cagctctggtatgatatgctcggaatccctgaagatggcagtggatttgattacggtttc
aagctgaaagagaagaagaaggagcaggagattaaaggacacacagatgaggcgaatgca
gtgttgatggatgagaagggtgatctgctagctgatgagcacttcctgatggtgacacag
ctccaatgggaggatgatgttatctggaatggagatgatgtaaagcacaaagggactaag
acacagcgggcaagtttggcaggctggctgccatccagcatgactagaaatgccactgca
tacaatgcccaacagggtttgaaccgtagtggctctttgctcaatccaccaattccacta
tcacagaaaccaaatgtagcaggagccctatgtataacaaagggcaaagaaaagcaggct
tctgaacagcaagtttccctggatgaagacaagccctggtactctattttcccaattgat
aatgaggagttagtatatggccgttgggaagacaatatcatctgggatgatcaggcaatg
gaaacctacttagatccacctgttttaacactcgatccaaatgatgaaaacataattcta
gaaattcctgatgaaaaggaagaaatgactttgaactctccatccaaggagaacaagaaa
gaatcttctctaaagaagagtcgaatcctgttgggaaaaacaggtgtcatcaaggaagaa
ccacagcagaacatgtctcagccagaggtgaaggatccttggaatctctcaaatgatgag
ttttactaccccaaacagcagggacttcgaggaacctttggaggcaacatcattcagcac
tctatcccagcagtggaacttcgccagccattttttcccacccatatgggtcctatgaag
ctccgacaatttcatcggccacccctgaagaagtactcttttggtgccttgtcccagcca
ggccctcattctgtgcaacctctgctgaaacacataaaaaagaaagccaagatgagagaa
caggagcgtcaggcttctggcgggggtgaaatgttcttcatgcgcacaccacaggaccta
actgggaaggatggagatctcatccttgctgagtacagtgaagaaaatgcccctttaatg
atgcaggttggcatggcaacaaaaattaaaaattactacaaaaggaaacctggcaaagat
ccaggagctccagactgtaaatatggagagactgtttattgtcacacttctccgttcctg
ggttctctgcatccaggccagttactgcaggcatttgaaaacaaccttttccgggcccct
atctacctacataagatgcctgaaacggatttcctgattatccggacacgacaaggctat
tatgttcgagaattagtggatatttttgtagttggtcaggagtgcccactttatgaagta
cctggtcccaactctaaacgagctaacacccatatcagagattttctgcaggtttttatt
tatcgcctcttctggaaaagcagagaccgtcctcggagaattcgcatggaggatatcaag
aaggcctttccttcgcactcagagagtagcatccgaaagcggctaaagctttgtgctgat
ttcaaacgcacagggatggattcaaactggtgggttttaaagccagatttcagattgcca
acagaggaagagatcagagcaatggtatccccagaacagtgctgtgcttattacagcatg
attgcagctgagcaacgactgaaggatgcaggttacggggagaaatctttctttgcacca
gaagaggagaatgaagaggatttccaaatgaagattgatgatgaggtgcgtacagctcca
tggaacaccacacgagctttcattgctgctatgaaggggaagtgcctcctagaagtgacg
ggtgtagcagatcctactggttgtggtgaaggattttcttatgtgaagattccaaacaaa
ccaactcagcagaaggatgataaagaacctcaaccggtgaaaaaaacagtgactgggaca
gatgctgatctgcgccgactttctctcaaaaatgccaaacagctactgcgcaaatttgga
gtgcctgaagaggagataaagaagctgtccaggtgggaagtgattgatgtggtacgtacc
atgtctacagagcaggctcgttcaggggaaggtcctatgagcaaatttgcacgtgggtct
cgcttttctgtagcagagcatcaggagagatacaaagaagagtgtcagcgcatctttgat
ttacaaaataaggttctggaatcgactgagattctgtcaacagacacagatagcagctca
gctgaagacagcgactttgaagagatgggaaagaatattgagaatatgttacaaaacaag
aagactagctctcagctttctcgggaaagagaagagcaggaacgaaaggaattgcaaagg
atgcttttgggagaagatggtggcaatgacaaagagaggggcaaaaaggacaggagagat
aaaaaggggctgtcatcaacttcaggagcctcagcaaactctcacaaagatgatgacact
gcctctgtaaccagtcttaattcctctgccactggccgccgcctcaaaatctatcgcacc
tttagagatgaggatgggaaggaatacgtgaggtgtgagacagttcggaagcctgctgtt
attgatgcctactgccgaatacggactaccaaggatgaagagttcatacgaaagtttgct
ctatttgatgaacagcaccgtgaggaaatgcggaaggagcggcgcaggatccaggaacaa
ttgcggcgattgaaacggaaccaagaaaaagagaaactcaagggccctccagaaaagaag
cccaagaaaatgaaagagcgtccagacttgaagctaaagtgtggagcatgtggtgcaatt
ggccatatgagaactaataaattctgccctctttactaccaaacaaatgctccaccttct
aatcctgtggcaatgacagaagagcaggaggaagagctggaaaaaacagtcattcacaat
gataatgaagaactcatcaaagtagaaggaacaaaaattgtcctaggaaaacaactgatt
gagagtgcagatgaggttcgcagaaaatcactggtcctaaagtttccaaagcagcaactt
cctccaaagaagaagcgtcgagtagggacaacggttcactgtgattatctgaatcgtcct
cataaatctatccatcgacggcgaacagatcccatggtgacgctgtcatccatcttggag
ggaatcatcaatgacataagggatcttcctaatacgtacccctttcatacacctgtaaat
ccaaaagttgttaaagattattataagattattactcggcccatggatttacagacccta
cgtgaaaatgttcgtaagcgacagtacccttcccgagaagagttcagagaacatctggaa
ctaattgttaagaacagtgcgacatacaatggcccaaagcactcactgacacagatatct
cagtccatgctggatttgtgcgatgaaaagctgaaagagaaggaagataaactggctcga
ttagaaaaagcaattaatcccctcctggatgatgatgatcaagtggccttttccttcatt
ttggataacattgtcactcaaaagatgatggcagttccagattcttggccatttcatcat
ccagttaacaaaaagtttgttcctgattattacaaggtgattgctaatccaatggatctg
gagactatccgcaagaatatctccaagcacaaataccagaacagagagactttcctggat
gatgttaacctcatccttgccaacagcattaagtacaatgggccagacagtcagtacaca
aaaacagcccaggagattgtgaacatctgttatcaaactttagctgagtatgatgagcac
ctaactcaacttgagaaagacatctctactgctaaggaagcagcgctagaggaggcagat
ctggaaagtcttgatcctatgacccctggtccctacactccgcagccacctgatttgtat
gataccaacacttccctcagtatgtcacatgatgcttcagtctatcaagatgaaagcaat
ttgtctgctatggacactcccatcactaccccagagaagcaaggaactcagatgcgccag
gggcgaggtaggctgggcgaggaagactctgatgtagatattgaagggtttgatgaggat
gatgatgggaaacctaagactccagccccagaagttgaagatgcagatggtgaccttgct
gatgaagaagaaggatcagcccagcagccccaggccagtgtcctctatgaagatttgctc
atgtcagatggagaagatgatgatgatgatgatgggagtgacgaagagggagataatcct
ttctcatccatccagctgagtgaaagtggcagtgactcagatgtggagcccactgcagtg
agacctaaacaacctcatgttcttcaagagaacacacgaatgggcatggacaatgaagaa
agcatgatgtcttatgaaggagatgttggggagacatcgcatgttatggaggacagcaat
atcag
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integrated database retrieval system
