Apaloderma vittatum (bar-tailed trogon): 104268235
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Entry
104268235 CDS
T08559
Symbol
RBBP8
Name
(RefSeq) DNA endonuclease RBBP8
KO
K20773
DNA endonuclease RBBP8 [EC:3.1.-.-]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104268235 (RBBP8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avit03400
]
104268235 (RBBP8)
DNA repair and recombination proteins [BR:
avit03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-C complex
104268235 (RBBP8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CtIP_N
SAE2
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
104268235
NCBI-ProteinID:
XP_009877772
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
LLLKVDFLVENKCVDAERLEEFYTKNQQLREQQKALHDTIKVLEDRLRAGLCDRCAVTEE
HMRKKQQEFENIRQQNLKLITELMNEKNNLQDENKKITEQFQQLQKELEERKQQALELEE
GVIPDSPVLTSSFSVVNRMKRKKENRHIRYTEHTHPNVELVESNSEFGKIPLFSTQVNSH
HGEEILVADTCDPQLSPVTNKPRVGGYPVPKPSFNLAAVVAETIGLDVQEEPESQSMLSP
PRANAVMSQAPESMQSEDSRKHPASESRNDDKNLGLSDPSQNTPPHVDWDSRVASPVFGA
SGSMKNNSSTSHASSILDSGWKPNIKTNLFNNPSSCRSHKSRSKSEDVAFVAPLNLGTEI
NSVISQASIIRQMVVKKNTETVTCVGNTCTAKNGVIKSDFLLVHQKQLEGRCAKRRKAED
EHAVSCEKTSFNKENSVPFQSDIQHVNGEHTVDKPLDLSDRFSGVRCQEKKEGSEDTCKN
RLKQVTLHDIFSQFGKPIPEVSSSVQNASNESSLLGRGLQDESYVQEAVLGKTFLDKKKQ
IQMKEEVPPFKVAPLPSSVDTEQLFDDVKVASGHVPNRKKTRTEHGESEPASVLQPNPCR
LSKNQRLQDEQDLNDKPSLENLQWSLDPGADISQYEMDITVIDTKGSSQSRVGGEVVDLD
YTYVSESVLLKTKKQEQNQESSPREKKNNDTFAEMFDRTTHEEYESCLPEDCPSTGDEKE
TLHDEEQDKGMTAASKKLKKHEDKQDKAKQKAFVEPYFKSDERKNTMLDFPHIEVIRKKE
ERRKLPGHTCKECEIYYADIPEEERAKKLASCSRHRFRYIPPNTPENFWEVGFPSTQTCV
ERGYVKEDLAPCQRPKRRQPYAVMFSPKGKEQKT
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
cttttactgaaagttgatttccttgtagaaaataaatgtgtggatgcagagaggcttgaa
gagttttataccaagaatcaacagctcagagaacagcaaaaagcacttcatgacactatc
aaggttttagaagacagattaagagcaggattatgtgatcgttgtgctgtaactgaagaa
catatgagaaagaagcagcaggagtttgaaaacatccgacagcagaatcttaagcttatc
actgagcttatgaatgaaaaaaacaacttacaggatgaaaataaaaagataactgaacag
ttccagcaattacagaaggagctggaggagcgaaagcaacaagcactggaattagaagaa
ggagtaattccagattctccagttctgacttcttcattttctgtggttaatcgtatgaaa
agaaaaaaagaaaataggcatatccgatacacagaacatacacacccaaatgtggaactt
gtggaaagcaacagtgagtttggaaaaattcctctattttccacacaagttaacagtcac
catggagaagagatactagtggcagacacctgtgatccacagttgtcccctgtgacaaat
aaaccaagggtgggaggttatcctgttccaaagccatcttttaacttggctgcagttgtg
gcggaaacaattggacttgatgttcaagaggaacctgagtcacagagcatgctgagtcct
ccacgcgctaatgctgttatgagccaggccccagagagcatgcagtctgaagattctaga
aaacatccagcttctgaatcaagaaatgatgacaagaatttaggtctttcagatccatct
cagaacactccgccacatgttgattgggattctcgggtagcttctccagtttttggagct
tctggcagtatgaagaacaactcaagtacaagtcatgccagttctattttagattcagga
tggaagcctaatatcaaaactaacctcttcaacaatccttccagttgcagatctcataaa
agtagatcaaaatctgaagatgttgcttttgttgcaccactgaaccttggcacggaaatc
aactcggttatcagccaggcctctatcattaggcaaatggttgtgaagaagaacactgag
actgtaacatgtgttggaaacacttgcacagctaaaaatggggtgatcaagagcgatttc
cttcttgtacaccagaagcagctagaaggcaggtgtgctaagagaaggaaagctgaagat
gagcatgcagttagctgtgaaaagacatccttcaacaaagagaactctgtgccctttcag
tcagacattcagcatgttaatggggagcatacagttgataagccgttggacctgtctgat
cgcttctctggagttcgttgtcaagagaaaaaagaaggaagtgaggacacctgtaaaaat
agactgaaacaggtgactctgcatgatattttttcacagtttgggaagcccattcctgaa
gtttcatcatctgttcaaaatgccagcaatgagagcagtttgcttggcagaggtttacaa
gacgaatcctatgtacaagaggcagtgctgggaaaaacattcctggataagaaaaaacag
atccaaatgaaagaagaagttcctcccttcaaagttgcaccactgccaagttctgtagac
acagagcaactttttgacgatgtgaaggttgccagcggccatgtaccaaatagaaagaaa
acaaggacagaacatggagagtctgaaccagcatctgtacttcaaccaaacccttgtaga
ctatcaaaaaatcaacgactgcaagatgagcaagacctgaatgataaaccttctttagaa
aacctccagtggagcctagacccaggagctgacatttcacagtatgagatggatattact
gtgattgatacaaaggggagttctcaatcaagagttggaggggaagttgttgatttggat
tatacatatgttagcgaaagtgtgttattaaaaacgaaaaaacaagagcaaaaccaggaa
agcagtccaagagaaaaaaaaaataatgataccttcgcagagatgtttgatcggacaacc
catgaagaatatgaatcctgcctaccagaagattgtccttctacaggcgatgagaaagaa
actcttcatgatgaagagcaggataagggaatgacagcagcaagcaagaaactgaagaaa
cacgaggacaaacaagataaagccaagcagaaagcttttgtggagccatatttcaaaagt
gatgaaagaaagaataccatgttagattttcctcatattgaggttattcgaaagaaagaa
gaaagaagaaaattgcctggccatacttgtaaggaatgtgaaatatattatgcagacatt
ccagaagaagagagagcaaagaaactagcttcctgttcaagacacagatttcgttacatt
cctccaaatactcctgaaaatttctgggaggttggatttccttcaacccaaacttgtgtg
gaaagaggatatgttaaagaggaccttgctccttgtcagcgtccaaaaagacgacagcct
tatgccgtaatgttttcgccaaaaggcaaagagcagaagacataa
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