Apaloderma vittatum (bar-tailed trogon): 104271744
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Entry
104271744 CDS
T08559
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04110
Cell cycle
avit04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104271744 (SMC3)
04114 Oocyte meiosis
104271744 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avit03036
]
104271744 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
avit00535
]
104271744 (SMC3)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104271744 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
104271744 (SMC3)
Proteoglycans [BR:
avit00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104271744 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
Baculo_PEP_C
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
104271744
NCBI-ProteinID:
XP_009864824
LinkDB
All DBs
Position
Unknown
AA seq
1223 aa
AA seq
DB search
MGERLKSELTQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFS
HLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKK
MVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEE
SISLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE
TRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAE
RQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSV
KEKEERGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIA
AIHKDLEDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWR
EENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHG
IVMNNFECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLD
VRDTAYPETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLE
GDQVSHRGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIENINNEIDQL
MNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTR
ESLKAELGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNE
NLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGI
KELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAF
EKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSI
MELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGS
TESERGSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKC
DPAPFYLFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNK
VSHIDVITAEMAKDFVEDDTTHG
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaagacttaagagtgaacttacacaggtaatcattcagggcttccgaagctac
agggaccaaaccattgtggacccattcagctcaaaacacaatgtcattgtgggaagaaat
ggatctggaaaaagcaacttcttttatgcaattcagtttgtcctcagtgatgagtttagt
catcttcgcccagagcagagactggctttgttgcatgaaggtacaggccctcgtgttatt
tcagcttttgtggaaattatttttgacaattcagacaaccggttaccgattgataaagag
gaagtatcccttcgcagagttattggagccaagaaggaccaatatttcttagacaagaaa
atggtgacgaaaaatgatgtgatgaatcttcttgaaagtgcaggattttctcgcagtaat
ccctactatattgtcaaacaaggaaagatcaaccagatggccacagctcctgactctcaa
agattgaagttactaagagaagtagctggtaccagagtgtatgatgagcgtaaagaagag
agtatttccctgatgaaagaaacagagggcaagcgagagaagatcaatgagttgttgaaa
tacattgaagagcgactgcataccctggaagaggagaaggaagaactggctcagtaccag
aaatgggataaaatgaggagagcattagaatacaccatttataatcaggagcttaatgaa
acccgagctaagcttgatgagctttctgccaaacgagagacaagtggagagaaatccagg
cagctgagagatgcacagcaagatgctagagataagatggaggaaatagaacggcaagtt
cgagaactgaagacaaagatttcagcaatgaaagaagagaaagaacagcttagtgctgaa
agacaggagcagattaaacagagaactaaattagagctgaaggctaaagacctgcaggat
gaactagctggcaacagtgagcaaaggaaaagactattaaaagagaggcaaaagcttctt
gagaaaattgaggagaaacagaaagaattagcagaaacggagccaaaattcaacagtgtt
aaagaaaaagaagagaggggaattgctagacttgcacaggctacacaggaaagaacagat
ctttatgcaaaacaaggtcgaggaagccagtttacttccaaagaagaaagggataaatgg
ataaagaaagagctgaagtctttagatcaagccatcaatgacaagaagcggcagattgca
gctatacacaaggatttagaggatacagaggcaaacaaggagaaaaatttggaacagtac
agtaaactggaccaggatcttaatgaagtgaaggctcgtgttgaagaactggacagaaag
tactatgaagtgaaaaataaaaaggatgaactacagagcgaaagaaattatctctggaga
gaagagaatgcagaacaacaagctctcgctgcaaagcgggaggatttagaaaagaaacag
cagcttctcagagcagcaacaggaaaggccattttgaatggtatagacagcataaacaaa
gttttggagcacttccgtcgcaaaggcataaaccagcatgttctaaatggctaccatggc
attgtgatgaataactttgagtgtgaaccagctttctacacctgtgtggaagttactgca
gggaacaggttgttctatcacattgtggattctgatgaggtcagtacaaagatcttaatg
gaatttaacaaaatgaaccttcctggagaagttactttcctccctctgaacaagctggat
gttagagatactgcttatcctgagactaatgatgctattcctatgatcagtaaactgaga
tataacccaagatttgacaaagctttcaaacatgtttttggaaagactctaatctgtcgt
agtatggaagtgtctacccagctggccagagctttcacaatggattgtattactctggaa
ggtgatcaagtgagccatcgtggtgctttgactggaggttactacgacacaaggaagtct
cggcttgaattgcagaaagatgttagaaaggcagaagaagaacttggtgaactcgaagca
aaactcaatgaaaacttacgcagaaacattgaaaatattaataatgagatcgaccagcta
atgaaccaaatgcagcaaattgagacacaacagagaaagttcaaagcctctcgagacagt
attttgtcagagatgaaaatgctgaaggagaagagacagcagtctgaaaagacatttatg
cccaagcaacgcagtttgcagagcttggaggcaagtttacatgctatggaatcaactaga
gaatcattaaaagcagaattggggactgatctgttgtctcagctcagtcttgaagatcag
aaacgtgtggatgctcttaatgatgaaattcgacaactacagcaagaaaacagacagctt
ttgaatgagaggattaaactagaaggcattatcacaagagttgaaacgtatctcaatgag
aatctgagaaaacgcttagaccaagtggaacaagaactgaatgagcttcgagaaacagaa
ggtggcacagtccttactgccacgacatcggaacttgaggccatcaacaaacgagtgaag
gatacactggcacggtcagatgatctggataattctattgacaaaaccgaagcaggaatt
aaagagcttcaaaaaagcatggaacgctggaagaacatggagaaggagcatatggatgcc
attaaccacgatacaaaagagcttgaaaaaatgactaacaggcaaggcatgctcctcaag
aagaaagaagaatgcatgaaaaaaatccgagagttgggttcacttccacaggaggctttt
gaaaagtatcagactttaagtttaaagcagttattccgcaagctggagcagtgcaatacg
gagctgaagaaatacagtcacgttaacaaaaaagctttggatcagtttgtgaatttctca
gagcagaaggaaaaattgataaaaagacaagaggaactggacaggggctacaaatccatc
atggagctgatgaatgtgcttgagctcaggaaatatgaggctattcagctgaccttcaaa
caggtgtcaaaaaatttcagtgaagtattccagaagttagtccctggtggcaaggccacg
ttagtgatgaagaagggagatgtggagggcagtcagtcccaggatgaaggtgaaggcagc
accgagagtgaaaggggatccggatctcagagcagtgttccatctgtagaccagttcact
ggagttggcatcagggtatcattcacagggaagcagggtgaaatgcgagaaatgcagcaa
ctttcagggggacagaaatccttagtggctctagccctgatctttgctatccaaaaatgt
gatccagctcctttttacttgtttgatgaaatcgaccaagccttggatgctcagcacaga
aaagctgtttcagatatgattatggaactagctgaacatgctcagtttattacaacaact
tttagacctgaactgcttgaatcagctgacaagttctatggtgtaaaattcagaaacaag
gtcagtcatattgatgtgatcacagcagaaatggccaaagactttgtagaagacgacacc
acgcatggttaa
DBGET
integrated database retrieval system
