Aeromonas veronii B565: B565_1308
Help
Entry
B565_1308 CDS
T01462
Name
(GenBank) LysM domain protein
KO
K19236
L,D-transpeptidase YcfS
Organism
avr
Aeromonas veronii B565
Pathway
avr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
avr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
B565_1308
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
avr01002
]
B565_1308
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avr01011
]
B565_1308
Peptidases and inhibitors [BR:
avr01002
]
Cysteine peptidases
Family C82
B565_1308
Peptidoglycan biosynthesis and degradation proteins [BR:
avr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
B565_1308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
AEB49343
LinkDB
All DBs
Position
complement(1431710..1432666)
Genome browser
AA seq
318 aa
AA seq
DB search
MRLPKLKPLPLTPALSLLLTAILLCAAPAEAKRYPLPAAGSRLIGELEDYIIQQNEHLEL
VGKNTQIGFLALLEANPGVDPYLPKPGTRLTLPTQMLLPDVPREGIVINLPELRLYYFPK
GKSEVIVLPIGIGDIGRETPEMTTTVIEKNPNPTWVPGPMVRKSWLEQKGITLPAVVPPG
PENPLGKFAMRLGYGKRDYLIHGTNKEFGVGLRVSAGCIRLRPDDIEALFKIVPIGTPVR
VINQPVKVAIEPDGRRWLEVHSPLSRTEEELENGAPLMLSPAIESFISAPDVMQDEVTAA
LESKNGLPRPISSQLVSG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgccgaaactcaagcccctacccttaacgcccgccctttccctgctgctgaca
gccatcctgctctgcgcggcgccggcagaggccaaacgctacccgctgccagctgccgga
agtcgcctcatcggtgagctggaggattacatcatccagcagaatgaacatctggagctg
gttggcaaaaatacgcaaattggatttttggcactgcttgaggcaaatccgggtgtagac
ccctatttacccaagcctggcacccgcttgacgctgcccacccagatgctgctgcctgat
gtgcctcgcgaggggatcgtcatcaatctgcccgaactgcgtctctactacttccccaaa
gggaagagcgaggtcatcgtgctgcccatcggaattggtgatatcggccgtgagactccg
gagatgaccaccaccgtcatcgagaagaatcccaacccgacctgggtacccggccccatg
gtgcgcaaatcctggctggagcaaaaagggatcaccctgcccgccgtggtgccccccggc
ccggagaatccccttggcaagttcgccatgcgccttggctatggcaagcgcgactacctg
atccacggcaccaacaaggaatttggcgttggcctgcgggtaagtgcaggctgcatccgg
ctgcgacctgacgatatcgaagccctgttcaagattgtgccgatcggcacgccggtacgg
gtcatcaatcaaccggtcaaggtagccatcgaaccggatgggcgccgctggctggaggta
cactccccgctctcccgcaccgaagaggagcttgaaaatggcgccccgctgatgttatca
ccggccatagagagctttatcagcgcacctgacgtgatgcaggatgaggtgacggcggcg
ctggagagcaaaaacggcctgccccgccccatcagcagccaacttgtcagtggctaa
DBGET
integrated database retrieval system