Acinetobacter wuhouensis: BEN71_13935
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Entry
BEN71_13935 CDS
T05823
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
awu
Acinetobacter wuhouensis
Pathway
awu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
awu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BEN71_13935 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
awu03021
]
BEN71_13935 (rpoD)
Transcription machinery [BR:
awu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BEN71_13935 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Cwf_Cwc_15
Motif
Other DBs
NCBI-ProteinID:
AXQ23108
UniProt:
A0A385C5Y9
LinkDB
All DBs
Position
2791677..2793569
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AA seq
630 aa
AA seq
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MSEMNSPTSQVAALISRGKEQGYLTYAEVNDHLPDSITESEQIEDIIQMLQDVGIPVHER
APETDDTMFEGNNEGGDEVAEEEAAAVLASVENEPGRTTDPVRMYMREMGTVELLTREGE
ISIAKRIEEGIRDVLHSIAYWPNAVEVVLQEYKDYETGERRLADILSGYLDPETDEEIPE
VLEEESEEIDEEEASSNKPTKDVKLDDDDEEEESGDSDDDSEGESGPDPEIAKMRFEELE
TVWNTAKSTIAQHGRNSAQGVEAMEALATVFMMFKFTPRLFDIISEMIRGTHEQIRTSER
EVMRYAVRRGRMDRTQFRTSFPGQESNPAWLDEQIAKAPAEQKGYLEKVRPDVLAFQQKI
ADIEKDLDLNVKEIKDISKRMAIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDL
IQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIN
RVSRQLLQEMGREPTPEELGERLEMDEVKVRKVLKIAKEPISMETPIGDDEDSHLGDFIE
DSNITSPVDAATSEGLKEATREVLENLTEREAKVLKMRFGIDMPTDHTLEEVGKQFDVTR
ERIRQIEAKALRKLRHPSRSEHLRSFLEND
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaatgaattcccctacttcgcaagtagcggctcttattagccgaggcaaagaa
caaggttacttaacttacgctgaggttaacgatcatcttccagactcaatcactgaaagc
gaacagattgaagacattattcaaatgcttcaagacgtgggtattcctgtacatgagcgc
gcgccagaaactgacgacaccatgtttgaagggaataatgaaggtggtgatgaagttgca
gaagaagaagctgctgccgtacttgcctctgtagaaaatgaacctggtcgtaccactgac
cctgtccgtatgtatatgcgtgaaatgggtacagttgagcttttgacacgtgaaggcgaa
attagcatcgcaaaacgtatcgaagaagggattcgtgacgttctacattcaattgcatac
tggccaaatgcggtagaagttgttttacaagaatataaagattacgaaacaggcgaacgc
cgtcttgctgatattttatcaggctatcttgaccctgaaactgatgaagaaattcctgaa
gttttagaagaagaatctgaagagatcgatgaggaagaagcgtcttcaaacaagccgacc
aaagatgtgaagttggatgatgatgacgaagaagaagagtcaggcgatagcgatgatgat
tctgaaggtgaatctggtccagaccctgaaattgccaaaatgcgttttgaagaattagaa
accgtttggaatacagcaaaatcaacaattgctcaacatggtcgcaatagtgcgcaaggt
gttgaagcaatggaagcgcttgcaactgtattcatgatgttcaaattcacaccacgctta
tttgatattatttcagaaatgattcgtggtacacatgagcaaatccgtacttctgaacgt
gaagtgatgcgttatgccgtgcgtcgtggtcgtatggatcgtacgcaattccgtacatca
ttcccaggtcaagaatcaaatcctgcttggttagatgaacaaattgcaaaagcacctgct
gagcaaaaaggttatttagaaaaagttcgtcctgatgtattggcattccaacaaaagatt
gcggatattgaaaaagatcttgatcttaacgttaaagaaattaaagacatttctaaacgt
atggcgattggtgaagccaaagcacgtcgtgcgaaaaaagaaatggttgaagccaactta
cgtttggttatttcgattgcgaaaaaatacaccaaccgtggtttacaattccttgattta
attcaggaaggtaacatcggtttgatgaaagccgtagataagtttgagtaccgtcgtggt
tataaattctcaacttatgcaacttggtggattcgtcaggcgattacccgttcgattgca
gatcaggcgcgtactattcgtattccagtacacatgatcgaaaccattaacaagatcaac
cgtgtatctcgtcaattacttcaagaaatgggtcgtgaacctacacctgaagaattgggc
gaacgtctggaaatggacgaagttaaagttcgtaaagtacttaaaatcgccaaagaaccg
atttcgatggaaacgccaattggtgatgatgaagattcgcacttgggtgacttcattgaa
gacagcaacatcacatcacctgtcgatgctgcaacttcagaaggcttaaaagaagcgact
cgtgaagttcttgaaaacttgactgaacgtgaagcaaaagtattgaaaatgcgttttggt
atcgacatgccaaccgaccatactttagaagaagtgggtaaacagtttgacgtaacacgt
gagcgtatccgtcagattgaggcgaaagcattacgtaaattacgtcatccttctcgctct
gaacacttacgttcattcttggaaaatgattaa
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