KEGG   Alcanivorax xenomutans: P40_13655Help
Entry
P40_13655         CDS       T04770                                 

Definition
(GenBank) DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
axe  Alcanivorax xenomutans
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:axe00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    P40_13655
   03410 Base excision repair
    P40_13655
   03420 Nucleotide excision repair
    P40_13655
   03430 Mismatch repair
    P40_13655
Enzymes [BR:axe01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     P40_13655
    6.5.1.6  DNA ligase (ATP or NAD+)
     P40_13655
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     P40_13655
DNA replication proteins [BR:axe03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    P40_13655
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     P40_13655
DNA repair and recombination proteins [BR:axe03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     P40_13655
   NER (nucleotide excision repair)
    Other NER factors
     P40_13655
   MMR (mismatch exicision repair)
    Other MMR factors
     P40_13655
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
2984599..2985477
Genome map
AA seq 292 aa AA seqDB search
MSRPILYFIGALLIAAALIMAAAARAAKAPALMQANIYQEGIDLTGYWVSEKLDGVRAFW
DGQQLLSRNGNVIDTPPGFTEGFPTQPLDGELWMGRGTFSQLVGILNRRTPSAEPWRHIY
FMAFDLPSSPGPFDQRLPRLRKLIDDAALPHLHMVDQRRGRDHATLMRDLERVVAAGGEG
LMLHRGGAPYRGERNDDLLKVKPYLDAEAEVVAVIPGEGKYTGMMGALLVKTPGGRHFRL
GTGFSDALRARPPAIGSVVTYKYHGHTRHGLPRFASFLRLREEGPGFTRSSR
NT seq 879 nt NT seq  +upstreamnt  +downstreamnt
atgtcccgcccaattttgtacttcatcggcgcgttactgatcgccgctgctctgataatg
gcggcggcggcccgggcggcgaaagcaccggcgctgatgcaagcgaatatttatcaagaa
ggcattgatctgaccggttactgggtcagcgagaaactggatggcgtgcgcgctttctgg
gacggccaacagttgttgtcacgcaacggcaacgtgatcgataccccaccgggctttacc
gaaggttttcccacgcagcccctggacggcgagctgtggatggggcgcggcaccttcagc
cagctggtggggatactcaaccggcgcacgccgtcggcggagccttggcggcacatttat
ttcatggcgttcgacctgccctcatccccgggcccgttcgatcagcgcctgccgcgcctg
cgcaaactgatcgacgatgccgccctgccccaccttcatatggtcgaccagcgccgggga
cgcgaccacgccacgctgatgcgcgatctggagcgggtggtggcggcgggcggagaaggc
ctgatgctgcatcgtggcggcgcgccctaccggggcgaacgcaacgacgatctgctcaag
gtgaaaccctacctggacgcggaagcggaagtagtcgcggtgatccccggcgaaggcaag
tacaccggaatgatgggggcgctgctggtgaaaacgcccggcgggcgtcatttccgtctg
ggcaccggattcagcgatgcattgcgagcacggcctccggccattggcagcgttgtcacc
tacaaatatcacggccacacccgccacggcctgccccggttcgccagtttcctgcgcctg
cgcgaagaaggtccgggctttacacgctcctcgcgctag

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