Alloalcanivorax xenomutans: P40_19510
Help
Entry
P40_19510 CDS
T04770
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
axe
Alloalcanivorax xenomutans
Pathway
axe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
axe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
P40_19510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axe03021
]
P40_19510
Transcription machinery [BR:
axe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P40_19510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_11
HTH_Tnp_ISL3
HTH_28
Xre-like-HTH
HTH_31
HTH_24
Trp_repressor
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ARB47316
LinkDB
All DBs
Position
complement(4247855..4248376)
Genome browser
AA seq
173 aa
AA seq
DB search
MTIAGEKEAFERRIDQLYHSHSGWLRGWLRRRLDCSHSAEDLTQDTFMRLLTARDRDGVL
AVREPRAYLSTVAGRLLVNHYRRLSLERTYKETLALLPPEQAPAPEWRLALLETLQEVDA
LLDRLPEKVRTAFLLSQLEGLTYAAIAEHLVVSERTVKRYMARALEECILLMD
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgccggtgagaaggaggccttcgagcgccgtatcgaccagttgtatcactcc
cattccggttggctgagagggtggctgcggcggcgcctggactgctcacatagcgccgag
gatctgacccaggataccttcatgcggctgctgaccgcccgtgaccgggacggggtgctg
gcggtgcgcgagccgcgcgcttacctgagtaccgtggccggtcgcttgctggtgaaccat
tatcggcgcctgtccctggaacggacctacaaggaaaccctggcgctgctgcctccggag
caggcgcctgcgccggaatggcggctggccttgctggaaacgctgcaggaagtggatgct
ctcctggaccggttaccggaaaaggtgcgcaccgcttttctcctgtcccaattggaaggg
ctgacctatgccgccatcgccgaacatctggtggtgagcgagcgcaccgtgaaacgctac
atggcccgggccctggaagaatgcattctgctgatggactga
DBGET
integrated database retrieval system