KEGG   Alloalcanivorax xenomutans: P40_19510
Entry
P40_19510         CDS       T04770                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
axe  Alloalcanivorax xenomutans
Pathway
axe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:axe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    P40_19510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:axe03021]
    P40_19510
Transcription machinery [BR:axe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     P40_19510
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 GerE HTH_11 HTH_Tnp_ISL3 HTH_28 Xre-like-HTH HTH_31 HTH_24 Trp_repressor HTH_38
Other DBs
NCBI-ProteinID: ARB47316
LinkDB
Position
complement(4247855..4248376)
AA seq 173 aa
MTIAGEKEAFERRIDQLYHSHSGWLRGWLRRRLDCSHSAEDLTQDTFMRLLTARDRDGVL
AVREPRAYLSTVAGRLLVNHYRRLSLERTYKETLALLPPEQAPAPEWRLALLETLQEVDA
LLDRLPEKVRTAFLLSQLEGLTYAAIAEHLVVSERTVKRYMARALEECILLMD
NT seq 522 nt   +upstreamnt  +downstreamnt
atgacgatcgccggtgagaaggaggccttcgagcgccgtatcgaccagttgtatcactcc
cattccggttggctgagagggtggctgcggcggcgcctggactgctcacatagcgccgag
gatctgacccaggataccttcatgcggctgctgaccgcccgtgaccgggacggggtgctg
gcggtgcgcgagccgcgcgcttacctgagtaccgtggccggtcgcttgctggtgaaccat
tatcggcgcctgtccctggaacggacctacaaggaaaccctggcgctgctgcctccggag
caggcgcctgcgccggaatggcggctggccttgctggaaacgctgcaggaagtggatgct
ctcctggaccggttaccggaaaaggtgcgcaccgcttttctcctgtcccaattggaaggg
ctgacctatgccgccatcgccgaacatctggtggtgagcgagcgcaccgtgaaacgctac
atggcccgggccctggaagaatgcattctgctgatggactga

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