Achromobacter xylosoxidans NH44784-1996: NH44784_003001
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Entry
NH44784_003001 CDS
T02785
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
axo
Achromobacter xylosoxidans NH44784-1996
Brite
KEGG Orthology (KO) [BR:
axo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
axo03009
]
NH44784_003001
Enzymes [BR:
axo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
NH44784_003001
Ribosome biogenesis [BR:
axo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NH44784_003001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CCH04287
LinkDB
All DBs
Position
complement(288127..289863)
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AA seq
578 aa
AA seq
DB search
MQDDNPRPDDAVSNAPAEASAGREPAAEGEARGRGRKLRTPFRRRRGDAAAEQAPATEGQ
AATAGQADAADARGGEQEAEQALSYLETADRMEQRLGKYLNSEAVMPKLHKVLADAGIGS
RREMEELIVAGRVSVNGEPAHIGQRVAPNDQVRVNGKPIMRTNTKKPPRVILYHKPAGEI
VSHDDPGGRASVFARLPKLRTGKWLSVGRLDLNTEGLLIFTTSGDMANRIMHPRYGTERE
YAVRVLGEMDDAQRQSLVDGIELEDGVAAFGALDYLGGDGSNRWYRVTLQEGRNREVRRM
FEAVGVTVSRLIRTRFGDVVLPRTLRRGRWEELDASLVTALMVQLGLLREDDESGGNRRR
SKQPQSHDSALPPGFGTMDRNGMNGARIGRRGKIQGGRAGSAGQAAACPSDPFGTGLMIA
GGYANGHPLAGEANGNRKGGKPTGGRGQAGAGGKSGGRGGKAGGGKARGVRAAAAGSAGA
PEATVGAGRKPAGAKPGGKPAGARGGNAGRGNKPAGAGRAGNKAEGARAGGNKGPGAGGK
PRAARGGSAPRGDDWQPRGASAHESRLGVMGGRGGRGR
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgacaacccccgtccggacgacgccgtttccaacgcgccggcggaagcttcc
gccggccgcgaaccggccgccgagggcgaagcccgtggccgtggccgcaaattgcgcacg
ccgttccgccgccgtcgcggtgacgcggccgccgagcaggctcccgctaccgaagggcag
gccgcgacggctggccaggcggatgcggcggatgcccgtggcggcgagcaggaagccgag
caggcgctgtcgtacctcgagaccgccgaccgcatggagcagcggttgggcaagtacctg
aacagcgaagccgtcatgcccaagctgcacaaggtgctggcggatgcgggcattggctcg
cgtcgagagatggaagagctgatcgtcgccggccgtgtatcggtcaacggcgagccggcg
cacatcggccagcgcgtagcgccgaatgaccaagtgcgggtcaatggcaagccgatcatg
cggaccaataccaagaagccgccgcgcgtgatcctgtatcacaagccggcaggtgaaatc
gtcagccatgacgatccgggcggccgcgccagcgtgtttgcgcgcctgcccaagctgcgc
accggcaagtggctgtcggtcggccggctcgatctgaataccgagggtctgctgatcttc
accacgtcgggcgacatggccaaccgcatcatgcacccgcgttacggcaccgagcgtgaa
tacgccgtgcgtgtgctgggcgagatggacgacgcgcagcgtcaatcgctggtcgatggc
atcgagctggaagacggcgtggccgcttttggcgcgctcgattacctgggtggcgacggc
agcaaccgttggtaccgggtgacgctgcaggaaggccgcaatcgcgaagtgcgccgcatg
ttcgaggcggttggcgtaacggtcagccggctgatccgcacccgctttggcgacgtggtg
ttgccccgcacgctgcgtcgtggccgctgggaagaattggacgcctcgctggtcaccgcg
ctgatggtgcagctcgggctgttgcgtgaagacgacgagtcgggcggcaaccgccgccgc
tccaagcaaccgcagtcgcatgacagcgccttgcctcccggctttggcaccatggaccgc
aacggcatgaacggtgcccgcatcggccgtcgcggcaagatccagggtggccgtgcgggc
agcgctggccaggcggcggcgtgtccctccgatcccttcggaaccgggctgatgatcgcg
ggcggctatgccaatgggcaccctctggcgggcgaagccaacggcaatcgcaagggcggc
aagcccactggcggtcgcggccaggcgggcgcgggtggcaagtccggcggacgcggcggc
aaggcgggtggcggcaaggcgcgcggcgtgcgcgccgcggccgctggttcggccggcgcg
ccggaagcgacagtgggcgctggccggaaaccggcgggcgccaagcctggcggcaagccg
gcaggcgcgcgcggcggcaatgccggccgcggaaacaagccggcgggagccggtcgcgcg
ggcaacaaggccgagggcgcgcgcgccggcggcaacaaggggccgggcgccgggggcaag
ccgcgcgcggcccgcggcggttcggcgcctcgtggcgacgactggcagccgcgtggcgcc
tcggcccatgaatcgcgccttggcgtgatgggcggccgaggcggcagggggcgttaa
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