Achromobacter xylosoxidans NH44784-1996: NH44784_042471
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Entry
NH44784_042471 CDS
T02785
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
axo
Achromobacter xylosoxidans NH44784-1996
Pathway
axo02020
Two-component system
axo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
axo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NH44784_042471
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NH44784_042471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axo03021
]
NH44784_042471
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
axo02035
]
NH44784_042471
Transcription machinery [BR:
axo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NH44784_042471
Bacterial motility proteins [BR:
axo02035
]
Flagellar system
Flagellar assembly proteins
Stator
NH44784_042471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
Motif
Other DBs
NCBI-ProteinID:
CCH08190
LinkDB
All DBs
Position
complement(4538405..4539124)
Genome browser
AA seq
239 aa
AA seq
DB search
MRKLALQLLARLPASVELDDLIQAGMIGLLDAVRRYQETADAQFETYATTRIRGAMLDEL
RGQDWLPRSVRAKARKIEQAIQSLEQRLMRAPTEAEIAQQMEIPLNEYQTLLHDAQGVQI
VHYEDFATEPDTGSGSGQTDWTATLNHGAASGNPLDSLLAGDFRQALIHAIDSLPDREKL
LLSLCYEQGLNLKEIGAIMNVTEARVCQLRSQATARIRAKLREQAWQDLPQEGQIAQII
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgcggaagctggccctgcaattgctcgcccggctgcccgccagcgtcgaactggacgac
ctgatccaggccggcatgatcggcctgctggacgccgtgcggcgttaccaggaaacggcc
gacgcgcagttcgagacctacgccaccacccgcatccgcggcgccatgctcgatgagctg
cgcggccaggattggctgccgcgcagcgtgcgcgccaaggcccgcaagatcgaacaggcc
atccagtcgctggaacagcgactgatgcgcgcgcccacggaagccgagatcgcccagcag
atggagatcccgctgaacgaatatcagacgcttctgcacgacgcccagggtgtgcagatc
gtccactacgaagatttcgcgaccgaacccgatacgggctcgggctccggccagaccgac
tggaccgccacgctgaaccacggcgcggccagcggcaatccgctggattccctgctggcc
ggtgatttccgccaggcgctgatccacgccatcgactcgctgcccgaccgcgagaagctg
ttgttgtcgttgtgctacgagcaaggcctgaacctgaaggaaatcggcgcgatcatgaac
gtgaccgaggcccgcgtctgccagttgcgctcgcaggccaccgcccgcatccgcgccaag
ctgcgcgaacaggcctggcaggacctgccccaggaagggcagatcgcgcagatcatctga
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