KEGG   Azospirillum sp. B510: AZL_003120Help
Entry
AZL_003120        CDS       T01169                                 

Gene name
lig
Definition
(GenBank) DNA ligase (ATP)
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
azl  Azospirillum sp. B510
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:azl00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    AZL_003120 (lig)
   03410 Base excision repair
    AZL_003120 (lig)
   03420 Nucleotide excision repair
    AZL_003120 (lig)
   03430 Mismatch repair
    AZL_003120 (lig)
Enzymes [BR:azl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AZL_003120 (lig)
    6.5.1.6  DNA ligase (ATP or NAD+)
     AZL_003120 (lig)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     AZL_003120 (lig)
DNA replication proteins [BR:azl03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    AZL_003120 (lig)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     AZL_003120 (lig)
DNA repair and recombination proteins [BR:azl03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     AZL_003120 (lig)
   NER (nucleotide excision repair)
    Other NER factors
     AZL_003120 (lig)
   MMR (mismatch exicision repair)
    Other MMR factors
     AZL_003120 (lig)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
RhizoBase: 
UniProt: 
LinkDB All DBs
Position
359534..361135
Genome map
AA seq 533 aa AA seqDB search
MNRFAALIDALVFMPSRSGKIRLLVDHFASAPDPERGWALAALTGALSFREAKPAAIREL
AAARVDPVLLALSYDYVGDLAETVALIWPERPNPANSPPPGPSPGLDEVVEGLRAARRGQ
VMGLVEGWLDTLDPSGRFALLKLITGALRIGVSARLAKTALAEWGRAARPEVGVDDVEEV
WHGLTAPYPELFAWLEGRAERPATGAGAGFRPMMLSHPLEEEDRAGLDPAAYAAEWKWDG
IRVQLVARGGERRLYSRTGDDVSGAFPDIVDHMSFDAVLDGELLVARDGVVAPFNDLQQR
LNRKSVTARMLRDGPAWVRLYDILFDGEEDLRGLSFVERRARLERWFETVRPRRMDLSPL
VPFAGWDELAGLREGARENGIEGLMLKRRDSAYLAGRPKGPWFKWKRGALTLDTVMMYAQ
RGHGKRSSYYSDYTFGVWRGEELVPVGKAYSGFTDAELIELDRWVRTHTTRRYGPVREVE
AGLVLEVAFDSVHPSTRHKSGLAMRFPRIHRIRWDKPATEADRLETLAALVAG
NT seq 1602 nt NT seq  +upstreamnt  +downstreamnt
gtgaaccgcttcgccgcgctgatcgacgcgctggtcttcatgccgtcgcgcagcggcaag
atccgtctgctggtcgatcatttcgccagcgcgccggacccggagcgcggctgggcgctg
gcggcgctgaccggcgccctgagcttccgcgaggccaagccggccgccatccgcgagttg
gcggcggcgcgggtcgatccggtgctgctggcgctgtcctatgattatgtcggcgatctg
gccgagacggtggcgctgatctggccggaacggcccaaccctgccaacagcccgccgccc
ggcccatcccccggcctggacgaggtggtcgagggcttgcgggcggccaggcgcgggcag
gtgatggggctggtggaggggtggctcgacacgctcgatccgtcggggcgcttcgccctg
ctgaagctgatcaccggggcgctgcgcatcggcgtgtcggcgcggctcgccaagacggcg
ctggcggaatggggcagggcggcgcggccggaggtcggcgtcgatgacgtcgaggaggtc
tggcacgggctgaccgccccctatcccgagctgttcgcctggctggaggggcgggccgag
cgtccggcgaccggggccggcgccggtttccgcccgatgatgctgtcccacccgctggag
gaggaggaccgcgcgggactcgaccccgccgcctatgccgcggaatggaaatgggacggc
atccgcgtgcagctggtggcgcgcggtggcgaacggcggctctacagccgcaccggcgac
gacgtgtcgggcgcctttcccgacatcgtcgatcacatgagcttcgacgccgtgctcgac
ggtgagctgctggtggcgcgcgacggggtggtggcccccttcaacgacttgcagcagcgc
ctcaaccgcaagagcgtgacggcgcggatgctgcgcgacgggccggcctgggtccggctc
tacgacatcctgttcgacggcgaggaggatctgcgcggcctgtccttcgtcgagcgccgc
gcccggctggaacgctggttcgagacggtgcggccacggcggatggatctgtcgccgctg
gtgcccttcgccggctgggacgagctggcgggcttgcgcgagggcgcgcgggagaacggc
atcgaggggctgatgctgaagcgccgcgacagcgcctatctggccgggcggcccaagggg
ccgtggttcaagtggaagcgcggggcgctgacgctcgacaccgtgatgatgtacgcccag
cgcggccacgggaagcggtcgagctattattccgactacaccttcggcgtctggcgcggc
gaggagctggtgccggtcggcaaggcctattccggcttcaccgacgccgagctgatcgag
ctggaccgctgggtgcgcactcataccacccgccgctacggcccggtgcgcgaggtggag
gccgggctggtgctggaggtcgccttcgacagcgtccatccctccacccggcacaagagc
gggcttgccatgcgctttccccgcatccaccgcatccgctgggacaagccggccaccgag
gccgaccggctggagacgctggcggcgctggtggcggggtag

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