Azoarcus olearius BH72: azo1741
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Entry
azo1741 CDS
T00441
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
azo
Azoarcus olearius BH72
Pathway
azo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
azo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
azo1741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azo03400
]
azo1741
Enzymes [BR:
azo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
azo1741
DNA repair and recombination proteins [BR:
azo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
azo1741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_C
DNA_ligase_A_M
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
CAL94358
RhizoBase:
azo1741
UniProt:
A1K6A3
LinkDB
All DBs
Position
1908782..1911427
Genome browser
AA seq
881 aa
AA seq
DB search
MKAHDKRRDEARGMKPGAIAALAEYARKRDFSITAEPPVRGARPRAEGALGFVVQKHAAR
RLHYDFRLELDGTLKSWAIPKGPSLDPRVKRLAVHVEDHPLDYADFEGRIPQGQYGGGDV
IVWDRGLWQPRDPDPAAAYRAGKLSFHLLGEKLSGGWTLVRTRDGGSGDKAQWLLIKDAD
GAARPQSDYDVVVARPESVLTHAQLPARRDAAGAAGGEGAKKARVAALRGDAARNPAWIA
PELATAVEAPPPGEWRYELKFDGYRMLARVENGRARLYTRNHHDWTAKLAPLREAVESLG
ADSAWLDGEVVVTDAQGVPDFQALQNALELGRDADLRYFLFDLPYLDGEDLRKLPLEARR
ARLRALLGAHDHPRLAYSEDFPVPPQDILASACELRIEGVIGKRAGSPYRSVRSTDWIKL
KCRQRQEFVIVGYSAPQGGRQGFGALLLAVHDEAAGGRLRYAGKVGSGFSGASLKALHQR
MQPLRRPTPALALPVDSSVTRGATWLEPRLLCEVAFAMWTRDGLVRHAVFQGLRDDKPAA
DAVRERALPATAVARIQGDGRDDEDAPAPTAKVPSNGVRAGARRSPGTLAGVAISNPDRV
IDAASGVTKGELATFYCRIGAQLLPHLAGRPLSILRAPTGIDGERFFQRHADKMSMAGVH
LLPPDLDPDGERLMMVDTLEGVVGAAQMGTIEFHTWNATADRIERPDRIVFDLDPDPALP
WSRMVEATRLVLTLLDEIGLDAFLKTSGGKGIHVVVPLARRHDWEALKQFSRAVTRHLAR
ILPQRFADRMGPQNRVGRIFVDYLRNQRAASTVSAYSVRARPGLAVSVPITRQELERIDG
ADQWTVRNLHERLARLTRDPWEGYANRQVISAAMRAAVAAD
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcacacgacaaacgccgcgatgaagcgcgcggcatgaagccgggcgcgatcgcc
gctttggcggaatacgcccgcaagcgcgacttctcgatcaccgcggagccgccggtgcgc
ggcgcgcggccgcgcgccgagggcgccctcggcttcgtcgtgcagaagcatgccgcgcgc
cgcctgcactacgacttccgcctggaactcgacggcacgctgaagagctgggcgatcccc
aaggggccgagcctggacccgcgggtcaagcgcctggcggtgcacgtcgaagaccatccg
ctcgactacgccgacttcgagggccgcattccgcagggccagtacggcggcggcgacgtc
atcgtgtgggaccgcgggttgtggcagccgcgcgaccccgatcccgcggcggcctaccgc
gccggcaagctcagcttccacctgcttggcgaaaagctctccggcggctggaccctggtt
cgcacccgcgacggcggcagcggcgacaaggcgcaatggctgctgatcaaggatgcggac
ggcgctgcgcggccgcagtcggactacgacgtggtcgtcgcacggcccgagagcgtattg
acccacgctcaactgccagcgcggcgcgatgccgccggcgcggcgggcggcgagggcgcg
aagaaggcccgcgtggcagcgttgcgcggcgacgcggcacgcaatccggcctggatcgcg
ccggaactcgccaccgcggtggaggcgccaccgccgggcgaatggcgctacgaactcaag
ttcgatggctaccgcatgctcgcacgggtggaaaacggccgcgcgcggctctacacccgc
aaccatcacgactggaccgcaaaactggcaccgctgcgcgaggcggtggaaagcctgggt
gcggacagcgcctggctggacggcgaggtggtggtgaccgacgcccagggcgtgcccgat
ttccaggccctgcagaacgcgctggagctggggcgtgacgcggacctgcgctatttcctg
ttcgacctgccctacctggacggcgaagacctgcgcaagctgccgctggaagcgcgccga
gcccgcctgcgcgcactgctgggcgcgcacgaccatccgcggctggcgtattcggaggac
tttccggtgccgccgcaggacatcctcgccagcgcctgcgaattgcgcatcgagggcgtc
atcggcaagcgcgccggcagcccctaccgttcggtccgcagcaccgactggatcaagctc
aaatgccgccagcggcaggagttcgtgatcgtcggctacagcgcaccgcagggcgggcgc
caggggtttggcgccttgctgctggcggtgcacgacgaagccgcgggcgggcgcctgcgc
tacgccggcaaggtcggcagcggtttcagcggcgccagcctgaaggccttgcaccagcgc
atgcagccactgcgccgcccgaccccggcgctggcgctgccggtcgatagcagcgtcacc
cgcggcgccacctggctggagccgcgcctgctgtgcgaggtggcgtttgcgatgtggacc
cgcgacgggctggtgcgccatgcggtgttccagggcctgcgcgacgacaaacccgccgcc
gacgcggtgcgcgagcgcgcattgcccgccaccgccgtggcacgcattcaaggtgacgga
cgcgatgacgaagacgcgccggcgccgaccgccaaggtgccgtcgaacggcgtccgcgcc
ggcgcgaggcgcagtcccggcacgctcgcgggcgttgcgatcagcaacccggaccgcgtc
atcgacgccgccagcggcgtgaccaagggcgaactcgccaccttctactgccgcatcggc
gcgcagctgctgccccatctggcggggcggccgctgtccatcctgcgcgcgcccaccggc
atcgacggcgaacgcttcttccagcgccatgccgacaagatgtcgatggcgggcgtgcat
ctgctaccgcccgacctcgacccggacggcgagcgcctgatgatggtggatacgctggag
ggcgtggtcggcgcggcgcagatgggcacgatcgagttccacacctggaatgccaccgcc
gaccgcatcgagcgccccgaccgcatcgtgttcgacctcgaccccgaccccgcgctgccg
tggtcgcgcatggtggaggcgacccggctggtgctgacgctgctggacgaaatcggactg
gatgccttcctgaagaccagcggcggcaagggcatccacgtggtggtgccgctcgcgcgg
cggcacgactgggaggcgctgaagcagttctcgcgcgcggtcacccggcatctggcgcgc
atcctgcctcagcgctttgcggaccgcatggggccgcagaaccgggtagggcgcatcttc
gttgactacctgcgcaaccagcgcgcggcgagcacggtgtcggcctattcggtgcgtgcg
cgccccgggctggcggtgtcggtgccgatcacccgccaggagctggagcgcatcgacggc
gccgaccaatggacggtgcgcaacctgcacgagcggctggcgcggctcacccgcgaccca
tgggagggctacgccaaccgccaggtgatcagcgccgcgatgcgggccgcggtggcggcg
gactga
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