Burkholderia ambifaria MC40-6: BamMC406_2462
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Entry
BamMC406_2462 CDS
T00684
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BamMC406_2462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bac03400
]
BamMC406_2462
Enzymes [BR:
bac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BamMC406_2462
DNA repair and recombination proteins [BR:
bac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BamMC406_2462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
BLH_phosphatase
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ACB64940
UniProt:
B1YVD6
LinkDB
All DBs
Position
1:complement(2737851..2739233)
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AA seq
460 aa
AA seq
DB search
MLSDSPFSVPGATRGGDEVIPVSALNRAISTMLERSFPLLWISGEVSNFTRAASGHWYFS
IKDQQAQMRCVMFRGRAQYAEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRL
YEAFLRLKAQLEAEGLFAPERKRPLPAHPRGIGIVTSLQAAALRDVLTTLARRAPHIPVI
VYPAPVQGAGSAEKLVAAVQAANARREVDVLLVCRGGGSIEDLWSFNDEALARAIAASEL
PVVSGVGHETDFTIADFAADLRAPTPTGAAELASPQRALLLREVADRQRALARCLERGLE
QRAQQLDWLARRLVSPAERLRRQRTHVEQLAVRLASAASRPVRDARARFALAQLRWQRAR
PDPTQARHALAGLSQRLTVALQRRHERDTARVSACAARLEVLSPQRTLERGYAALIDAQT
GRAVRAPSALKPQRRLTVHLAEGSADVSLADVQPRLTDSI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctttccgactctcctttttccgttcccggcgccacccgcggcggcgacgaagtgatt
cccgtttcggcgctcaatcgcgcgatttcgacgatgctcgagcgctcgtttccgctgctg
tggatttcgggcgaagtgtcgaatttcacgcgcgccgcaagcggtcactggtatttctcg
atcaaggaccagcaggcgcagatgcgctgcgtgatgtttcgcggtcgcgcgcaatatgcg
gaattcacgccgcgcgaaggcgaccggatcgaggtgcgcgcggtcgtcacgatgtacgag
ccgcgcggcgaagtgcagctcaatgtcgaggccgtgcggcgcaccgggcaagggcgcctg
tacgaggcgttcctgcggctgaaggcgcagctcgaggccgaaggcctgttcgcgcccgag
cgcaagcggccgctcccggcgcacccgcgcgggatcggcatcgtcacgtcgctgcaggct
gccgcgttgcgcgacgtgctgaccacgctcgcgcgccgcgcgccgcacatcccggtgatc
gtctatccggcgcccgtgcagggcgcgggctcggccgagaagctcgtcgcggccgtgcag
gccgcgaatgcgcggcgcgaggtcgacgtgctgctggtctgccgtggcggcgggtcgatc
gaggatctgtggtcgttcaacgatgaagcgctcgcgcgcgcgatcgccgcgagcgaactg
ccggtcgtcagcggcgtcggccacgaaaccgatttcacgatcgcggacttcgcggccgac
ctgcgtgcgccgacgccgaccggcgcggccgaactcgcgagtccgcagcgcgcgttgctg
ttgcgcgaggtcgccgaccggcagcgcgcgctcgcgcgctgcctggaacgcgggctcgag
cagcgggcgcagcagctcgactggctcgcccgccggctcgtcagcccggccgaacggctg
cgacggcagcgtacccacgtcgagcaactggcggtgcggctcgcgtcggcggcgtcgcgg
ccggtgcgcgacgcgcgtgcgcgtttcgcgctcgcgcaactgcgctggcagcgcgcgcgg
cccgatccgacgcaggcgcgccatgcgctcgcagggctgtcgcagcgtctcaccgtggcg
ttgcagcgccgtcacgagcgcgacaccgcgcgggtatcggcctgtgcggcgcgtctcgag
gtgctgagcccgcagcgcacgctcgagcgcggctacgcggcgctgatcgacgcgcagacc
ggccgcgcggtgcgcgcgccgagcgcgttgaagccgcagcgccgcctgaccgtgcatctg
gccgaaggatcggccgacgtgtcgcttgccgacgttcagccgcggctgaccgattcgatc
tga
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